RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GYPCP04921 128 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 BPIP17213 487 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SPAM1P38567 509 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 PGDP52209 483 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 RPS15P62841 145 aaKnown RBP9.72□□□□□ -0.85
ACTN1-208ENST00000553370 DHX9Q08211 1270 aaKnown RBP9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SLC10A2Q12908 348 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-208ENST00000553370 ITGA9Q13797 1035 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 IHHQ14623 411 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 IQCB1Q15051 598 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SLC18A3Q16572 532 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
ACTN1-208ENST00000553370 LDLRAP1Q5SW96 308 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 TMTC4Q5T4D3 741 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 ZDHHC20Q5W0Z9 365 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 NPNTQ6UXI9 565 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 FAM151BQ6UXP7 276 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 B4GALNT4Q76KP1 1039 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 AMZ2Q86W34 360 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 TMEM126BQ8IUX1 230 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 FAM26EQ8N5C1 309 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SLC25A41Q8N5S1 370 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 PLD5Q8N7P1 536 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SPATA22Q8NHS9 363 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 BRSK1Q8TDC3 778 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 BLOC1S5Q8TDH9 187 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 CT55Q8WUE5 264 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 UBXN4Q92575 508 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SLC7A5P2Q9GIP4 190 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 ACTL8Q9H568 366 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 GLOD4Q9HC38 313 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 LRRC4CQ9HCJ2 640 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 DDX56Q9NY93 547 aaKnown RBP9.72□□□□□ -0.85
ACTN1-208ENST00000553370 OGFRQ9NZT2 677 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 ZNF624Q9P2J8 865 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-208ENST00000553370 NFKBIL1Q9UBC1 381 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SLC23A2Q9UGH3 650 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 VPS4AQ9UN37 437 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 SLC30A1Q9Y6M5 507 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 MYO9AB2RTY4 2548 aa9.72□□□□□ -0.85
ACTN1-208ENST00000553370 GLYATL1P3A0A0U1RQE8 302 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 OR2AG2A6NM03 316 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TTLL8A6PVC2 850 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 C21orf140B9A014 251 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 MTSS1O43312 755 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 CBFA2T2O43439 604 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 AGFG2O95081 481 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 SLC35G4P0C7Q5 338 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TMEM253P0C7T8 217 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 EBLN1P0CF75 366 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 GP1BBP13224 206 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 NELFEP18615 380 aaKnown RBP9.71□□□□□ -0.86
ACTN1-208ENST00000553370 MSH3P20585 1137 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 PMS2P54278 862 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 MLLT10P55197 1068 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 ACY1Q03154 408 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TMEM115Q12893 351 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-208ENST00000553370 PRKAA1Q13131 559 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TRIM14Q14142 442 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TFDP2Q14188 446 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 KCNAB1Q14722 419 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 ATP13A5Q4VNC0 1218 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 FAM182AQ5T1J6 154 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 CCDC181Q5TID7 509 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 AGAP9Q5VTM2 703 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 KAZNQ674X7 775 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 SLC9A4Q6AI14 798 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TCTN3Q6NUS6 607 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TMC3Q7Z5M5 1100 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 OOSP2Q86WS3 158 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 CCDC50Q8IVM0 306 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 RHOT1Q8IXI2 618 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 CNTD1Q8N815 330 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 IPMKQ8NFU5 416 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 SLC35G2Q8TBE7 412 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TFB1MQ8WVM0 346 aaKnown RBP9.71□□□□□ -0.86
ACTN1-208ENST00000553370 MR1Q95460 341 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 VPS35Q96QK1 796 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TRIB3Q96RU7 358 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 XPO4Q9C0E2 1151 aaKnown RBP9.71□□□□□ -0.86
ACTN1-208ENST00000553370 TRABDQ9H4I3 376 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 SLC40A1Q9NP59 571 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 LHX9Q9NQ69 397 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 ACSS2Q9NR19 701 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 HACD3Q9P035 362 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 FER1L5A0AVI2 2057 aa9.71□□□□□ -0.86
ACTN1-208ENST00000553370 NUP210LQ5VU65 1888 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 RELNP78509 3460 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 MACROD2A1Z1Q3 448 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 TLCD2A6NGC4 264 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 ZNF487B1APH4 448 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 RNF223E7ERA6 249 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 KCNJ13O60928 360 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 CPNE3O75131 537 aaKnown RBP9.7□□□□□ -0.86
ACTN1-208ENST00000553370 SCRG1O75711 98 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 FGF5P12034 268 aa9.7□□□□□ -0.86
ACTN1-208ENST00000553370 NFKB1P19838 968 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms