RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SEPT7Q16181 437 aaKnown RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 BBS9Q3SYG4 887 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 PERM1Q5SV97 790 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 AGAP9Q5VTM2 703 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 METRNLQ641Q3 311 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 KIAA0930Q6ICG6 404 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 NEPROQ6NW34 567 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 SFRP1Q8N474 314 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 CLDN19Q8N6F1 224 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 OTUD6BQ8N6M0 293 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 Q8N9G6 341 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 PATE1Q8WXA2 126 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 CCDC74AQ96AQ1 378 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 UBL7Q96S82 380 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 TCF12Q99081 682 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 SLC38A3Q99624 504 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 EBNA1BP2Q99848 306 aaKnown RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 RAB17Q9H0T7 212 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 SARS2Q9NP81 518 aaKnown RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 WHRNQ9P202 907 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 CLCA2Q9UQC9 943 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 FAM169AQ9Y6X4 670 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 ITPR1Q14643 2758 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 CTAGE15A4D2H0 777 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 A6NCN8 305 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 B4GAT1O43505 415 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 SGTAO43765 313 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 OR1I1O60431 355 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 TCEA3O75764 348 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 TTC4O95801 387 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 EML2O95834 649 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 FTH1P02794 183 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 CTAGE8P0CG41 777 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 PGAM1P18669 254 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 PBLDP30039 288 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 FASLGP48023 281 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 ARCN1P48444 511 aaKnown RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 DRG2P55039 364 aaKnown RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 CCL7P80098 99 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 PLOD1Q02809 727 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 HHEXQ03014 270 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 DHX9Q08211 1270 aaKnown RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 SPIDRQ14159 915 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 NFE2L1Q14494 772 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 HES3Q5TGS1 186 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 PACS1Q6VY07 963 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 LDB1Q86U70 411 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 CTAGE6Q86UF2 777 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 TRIM48Q8IWZ4 208 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 CTAGE4Q8IX94 777 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 LMNTD2Q8IXW0 634 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 GPR150Q8NGU9 434 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 GABPB2Q8TAK5 448 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 CALML6Q8TD86 181 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 SLC37A2Q8TED4 501 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 NAT14Q8WUY8 206 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 ZNF669Q96BR6 464 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 LRRC39Q96DD0 335 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 CRELD1Q96HD1 420 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 FCRL3Q96P31 734 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 TSSK1BQ9BXA7 367 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 DPH5Q9H2P9 285 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 LRRN3Q9H3W5 708 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 C20orf96Q9NUD7 363 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-225ENST00000551845 CPNE7Q9UBL6 633 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 MRFAP1Q9Y605 127 aa10.42□□□□□ -0.74
PTCH1-225ENST00000551845 ZCWPW2A0A1B0GU75 182 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 PRR19A6NJB7 356 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 GOLGA8KD6RF30 607 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 GOLGA8TH3BQL2 631 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 TMX2-CTNND1H3BSU7 103 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 PRMT5O14744 637 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 RPLP0P05388 317 aaKnown RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 ARNTP27540 789 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 SLC19A1P41440 591 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 RPL21P46778 160 aaKnown RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 PPM1FP49593 454 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 OR1D5P58170 312 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CAV1Q03135 178 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CYP4F3Q08477 520 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 TARDBPQ13148 414 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 RPA4Q13156 261 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 SEMA3AQ14563 771 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CLCA4Q14CN2 919 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 HIF1AQ16665 826 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CLPPQ16740 277 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 LONRF1Q17RB8 773 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 AMZ1Q400G9 498 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 RNF187Q5TA31 235 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CDCP2Q5VXM1 449 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 DUPD1Q68J44 220 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 PTRHD1Q6GMV3 140 aaKnown RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 RBM44Q6ZP01 1051 aaKnown RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 FAM83HQ6ZRV2 1179 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 MICALCLQ6ZW33 695 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 LRRC6Q86X45 466 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 RBM12BQ8IXT5 1001 aaKnown RBP10.41□□□□□ -0.74
PTCH1-225ENST00000551845 MMGT1Q8N4V1 131 aa10.41□□□□□ -0.74
PTCH1-225ENST00000551845 CEP112Q8N8E3 955 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms