RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GIMAP2Q9UG22 337 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 AMACRQ9UHK6 382 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 TSPYL4Q9UJ04 414 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 FBXL2Q9UKC9 423 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 PADI3Q9ULW8 664 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 USP32Q8NFA0 1604 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 PXDNQ92626 1479 aa4.81□□□□□ -1.64
LIMA1-205ENST00000550592 TCRBV21S2A2A0A5A6 115 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 A6NL46 340 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 INO80B-WBP1J3KQ70 363 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF217O75362 1048 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 PRSS2P07478 247 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 ABCB1P08183 1280 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF12P17014 697 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 NR2F2P24468 414 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 CLDN20P56880 219 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 UBXN2AP68543 259 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 SIRPAP78324 504 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 DDR1Q08345 913 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF155Q12901 538 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 NFATC4Q14934 902 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 SETMARQ53H47 684 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 KRTCAP3Q53RY4 240 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 C9orf152Q5JTZ5 239 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 ERMARDQ5T6L9 678 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 DHRS7BQ6IAN0 325 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 INTS8Q75QN2 995 aaKnown RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 LDB1Q86U70 411 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF34Q8IZ26 560 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 TDRD5Q8NAT2 981 aaKnown RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 OR5R1Q8NH85 324 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 HMGCLL1Q8TB92 370 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 MIB2Q96AX9 1013 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 PHF21BQ96EK2 531 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 PGAP3Q96FM1 320 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 SCMH1Q96GD3 660 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 CDRT15Q96T59 188 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 DDOQ99489 341 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 MTERF1Q99551 399 aaKnown RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 SEMA3CQ99985 751 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 NTPCRQ9BSD7 190 aaKnown RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 OR10A4Q9H209 315 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 SLCO5A1Q9H2Y9 848 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 RAD21L1Q9H4I0 556 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 LARSQ9P2J5 1176 aaKnown RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 CRNNQ9UBG3 495 aaPredicted RBP4.8□□□□□ -1.64
LIMA1-205ENST00000550592 HACL1Q9UJ83 578 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 PCDHGA5Q9Y5G8 931 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 TRPV2Q9Y5S1 764 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 LRRIQ1Q96JM4 1722 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 CROCC2H7BZ55 1655 aa4.8□□□□□ -1.64
LIMA1-205ENST00000550592 PTPN23Q9H3S7 1636 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 EIF2AK4Q9P2K8 1649 aaKnown RBP4.79□□□□□ -1.64
LIMA1-205ENST00000550592 MAGEB17A8MXT2 336 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 H7C0S8 307 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 MID1O15344 667 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 TBX10O75333 385 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CLDN14O95500 239 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 ITGB8P26012 769 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CAPZA2P47755 286 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 PPP5CP53041 499 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 BRWD1-AS2P59051 145 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 PPP2R2BQ00005 443 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 PDE1BQ01064 536 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 EGR4Q05215 589 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CALCRLQ16602 461 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 MEP1AQ16819 746 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CCDC96Q2M329 555 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 ZNF260Q3ZCT1 412 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CRY2Q49AN0 593 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CCNI2Q6ZMN8 369 aaPredicted RBP4.79□□□□□ -1.64
LIMA1-205ENST00000550592 PLPPR4Q7Z2D5 763 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 ADIPOR2Q86V24 386 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 GPR180Q86V85 440 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 ACVR1CQ8NER5 493 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 B4GALNT2Q8NHY0 566 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 TANKQ92844 425 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 PTERQ96BW5 349 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 MTBPQ96DY7 904 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 RADILQ96JH8 1075 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CNDP2Q96KP4 475 aaKnown RBP4.79□□□□□ -1.64
LIMA1-205ENST00000550592 C3orf30Q96M34 536 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 SLC22A12Q96S37 553 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CCDC106Q9BWC9 280 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 IL25Q9H293 177 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 RABEP2Q9H5N1 569 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 CCDC177Q9NQR7 707 aaPredicted RBP4.79□□□□□ -1.64
LIMA1-205ENST00000550592 WNT16Q9UBV4 365 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 KLHL20Q9Y2M5 609 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 NFS1Q9Y697 457 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 PLCH1Q4KWH8 1693 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 PRAG1Q86YV5 1406 aa4.79□□□□□ -1.64
LIMA1-205ENST00000550592 ASTN2O75129 1339 aaPredicted RBP4.78□□□□□ -1.64
LIMA1-205ENST00000550592 KIAA1210Q9ULL0 1709 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 THSD7AQ9UPZ6 1657 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 IGLV5-37A0A075B6J1 123 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 A0A1W2PP11 408 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 J3QR06 171 aa4.78□□□□□ -1.64
LIMA1-205ENST00000550592 NDUFS4O43181 175 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms