RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ZNF567Q8N184 647 aa21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 BLOC1S5Q8TDH9 187 aa21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 CD180Q99467 661 aa21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 ACTL8Q9H568 366 aa21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 FGF21Q9NSA1 209 aa21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 KLHL8Q9P2G9 620 aaPredicted RBP21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 INTUQ9ULD6 942 aa21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 PKP3Q9Y446 797 aa21.21■□□□□ 0.99
SMARCC2-210ENST00000550519 USP9XQ93008 2570 aaPredicted RBP21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 OR5K3A6NET4 321 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 TLCD2A6NGC4 264 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 BUD23O43709 281 aaKnown RBP21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 SPOPO43791 374 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 EBLN1P0CF75 366 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 MTHFD1P11586 935 aaKnown RBP21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 MPP3Q13368 585 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 SEMA5AQ13591 1074 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 LLGL1Q15334 1064 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 KAZNQ674X7 775 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 CERS6Q6ZMG9 384 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 ZC3H18Q86VM9 953 aaKnown RBP21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 P3H4Q92791 437 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 ZNF514Q96K75 400 aaPredicted RBP21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 RUFY1Q96T51 708 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 GPR87Q9BY21 358 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 MAN2B2Q9Y2E5 1009 aa21.2■□□□□ 0.98
SMARCC2-210ENST00000550519 F5H423 210 aaPredicted RBP21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 CBFA2T2O43439 604 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 PSTPIP1O43586 416 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 MFAP3LO75121 409 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 NTRK1P04629 796 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 PLCL1Q15111 1095 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 LONRF2Q1L5Z9 754 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 DNTTIP2Q5QJE6 756 aaKnown RBP21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 FAM199XQ6PEV8 388 aaPredicted RBP21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 D2HGDHQ8N465 521 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 FAM26EQ8N5C1 309 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 IPMKQ8NFU5 416 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 ZNF398Q8TD17 642 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 ZFPM2Q8WW38 1151 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 SEC14L1Q92503 715 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 INSM2Q96T92 566 aaPredicted RBP21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 ANP32EQ9BTT0 268 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 IMP3Q9NV31 184 aaKnown RBP21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 HRASLS2Q9NWW9 162 aa21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 CFAP20Q9Y6A4 193 aaKnown RBP21.19■□□□□ 0.98
SMARCC2-210ENST00000550519 MGAT4DA6NG13 374 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 PDGFAP04085 211 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 PTPN4P29074 926 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 PBLDP30039 288 aaPredicted RBP21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 MLLT10P55197 1068 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 HSD11B2P80365 405 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 LAMB3Q13751 1172 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 UGT8Q16880 541 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 TFDP3Q5H9I0 405 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 FNBP1LQ5T0N5 605 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 VSTM4Q8IW00 320 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 BEND7Q8N7W2 519 aaPredicted RBP21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 QKIQ96PU8 341 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 TRIM55Q9BYV6 548 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 TRHDEQ9UKU6 1024 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 ALG6Q9Y672 507 aa21.18■□□□□ 0.98
SMARCC2-210ENST00000550519 hCG_1818297A0A087WSY0 165 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 UBA6A0AVT1 1052 aaPredicted RBP21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 KLHL33A6NCF5 533 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 STX7O15400 261 aaKnown RBP21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 DNAJB5O75953 348 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 TPM1P09493 284 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 GP1BBP13224 206 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 MSH3P20585 1137 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 ARL4DP49703 201 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 HADHBP55084 474 aaKnown RBP21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 TUBB4BP68371 445 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 XRCC4Q13426 336 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 TUBB2AQ13885 445 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 PTPRCAPQ14761 206 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 ZNF517Q6ZMY9 492 aaPredicted RBP21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 OOSP2Q86WS3 158 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 CARFQ8N187 725 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 OR2L2Q8NH16 312 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 THAP4Q8WY91 577 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 C12orf66Q96MD2 445 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 TUBB2BQ9BVA1 445 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 WWP1Q9H0M0 922 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 KCND1Q9NSA2 647 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 ACSL5Q9ULC5 683 aa21.17■□□□□ 0.98
SMARCC2-210ENST00000550519 HACD1B0YJ81 288 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 CPNE3O75131 537 aaKnown RBP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 ZRANB2O95218 330 aaKnown RBP eCLIP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 PRAMEF1O95521 474 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 ZBTB11O95625 1053 aaPredicted RBP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 AKT1P31749 480 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 RPS18P62269 152 aaKnown RBP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 DUS1LQ6P1R4 473 aaKnown RBP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 DET1Q7L5Y6 550 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 SYVN1Q86TM6 617 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 ATCAYQ86WG3 371 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 KATNAL2Q8IYT4 538 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 SPDYE1Q8NFV5 336 aaPredicted RBP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 HAUS1Q96CS2 278 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms