RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TSPAN7P41732 249 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 WNT3AP56704 352 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 SQSTM1Q13501 440 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 KCNJ11Q14654 390 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 TPSAB1Q15661 275 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 RANBP10Q6VN20 620 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 PCGF5Q86SE9 256 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 TRIM48Q8IWZ4 208 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 TAB3Q8N5C8 712 aaPredicted RBP13.2□□□□□ -0.3
NUP188-211ENST00000550219 BMPERQ8N8U9 685 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 NAT8LQ8N9F0 302 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 GLYATL1Q969I3 302 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 SH3KBP1Q96B97 665 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 EID2BQ96D98 161 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 SNF8Q96H20 258 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 ZSCAN5AQ9BUG6 496 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 ASPSCR1Q9BZE9 553 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 LRRC40Q9H9A6 602 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 ARNT2Q9HBZ2 717 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 APMAPQ9HDC9 416 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 UBP1Q9NZI7 540 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 WHRNQ9P202 907 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 CPNE7Q9UBL6 633 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
NUP188-211ENST00000550219 KIR2DS5A0A0G2JLQ3 304 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 A0A0G2JNG1 304 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 TCRBV7S3A2A0A539 114 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 KIR2DS3K7RE56 304 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 SMAPO00193 183 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 NDC80O14777 642 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 PPFIA2O75334 1257 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 PMPCBO75439 489 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 PRKAR1AP10644 381 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 EPHA4P54764 986 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 GFERP55789 205 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 DCDC1P59894 354 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 BASP1P80723 227 aaKnown RBP13.19□□□□□ -0.3
NUP188-211ENST00000550219 CDK18Q07002 472 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 KIR2DS5Q14953 304 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 MORF4L2Q15014 288 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 ANKRD22Q5VYY1 191 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 IZUMO3Q5VZ72 239 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 DENND5AQ6IQ26 1287 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 CCDC70Q6NSX1 233 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
NUP188-211ENST00000550219 WDR74Q6RFH5 385 aaPredicted RBP13.19□□□□□ -0.3
NUP188-211ENST00000550219 ADGRG6Q86SQ4 1221 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 HOOK3Q86VS8 718 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 PPIL6Q8IXY8 311 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 UNC5BQ8IZJ1 945 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 TRAM1L1Q8N609 369 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 BBOF1Q8ND07 529 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 MCUQ8NE86 351 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 PLEKHG4BQ96PX9 1271 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 SLC12A9Q9BXP2 914 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.19□□□□□ -0.3
NUP188-211ENST00000550219 CLMPQ9H6B4 373 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 GPN2Q9H9Y4 310 aaPredicted RBP13.19□□□□□ -0.3
NUP188-211ENST00000550219 BPIFA1Q9NP55 256 aa13.19□□□□□ -0.3
NUP188-211ENST00000550219 LILRA5A6NI73 299 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 OR5K4A6NMS3 321 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 TMEM63AO94886 807 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 NDST3O95803 873 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 AGTP01019 485 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 VIPP01282 170 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 APRTP07741 180 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 TYRP1P17643 537 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 MC2RQ01718 297 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 GUCY2DQ02846 1103 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 CBLBQ13191 982 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 TRADDQ15628 312 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 BORAQ6PGQ7 559 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 CEACAM20Q6UY09 585 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 ARHGAP22Q7Z5H3 698 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 LRRTM4Q86VH4 590 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 TRAPPC5Q8IUR0 188 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 AVL9Q8NBF6 648 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 IPMKQ8NFU5 416 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
NUP188-211ENST00000550219 GDAP1Q8TB36 358 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 KIAA1143Q96AT1 154 aaPredicted RBP13.18□□□□□ -0.3
NUP188-211ENST00000550219 TGM7Q96PF1 710 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 TEFMQ96QE5 360 aaKnown RBP13.18□□□□□ -0.3
NUP188-211ENST00000550219 TRIM31Q9BZY9 425 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 DPH5Q9H2P9 285 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 MAGEE1Q9HCI5 957 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 TRIM39Q9HCM9 518 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 RAD18Q9NS91 495 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 STARD5Q9NSY2 213 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 SCHIP1Q9P0W5 487 aaPredicted RBP13.18□□□□□ -0.3
NUP188-211ENST00000550219 SLC23A2Q9UGH3 650 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 SPO11Q9Y5K1 396 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 CFAP46Q8IYW2 2715 aa13.18□□□□□ -0.3
NUP188-211ENST00000550219 MN1Q10571 1320 aaPredicted RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 ZNF891A8MT65 544 aaPredicted RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 E7EVH7 732 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms