RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 D2HGDHQ8N465 521 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 RASGEF1AQ8N9B8 481 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 DDHD1Q8NEL9 900 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 SLC35G2Q8TBE7 412 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 TFB1MQ8WVM0 346 aaKnown RBP13.27□□□□□ -0.29
TROAP-211ENST00000549891 TRIM55Q9BYV6 548 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 FANCEQ9HB96 536 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 IMP3Q9NV31 184 aaKnown RBP13.27□□□□□ -0.29
TROAP-211ENST00000549891 HRASLS2Q9NWW9 162 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 UBP1Q9NZI7 540 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 PSMD13Q9UNM6 376 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 FARSAQ9Y285 508 aaKnown RBP13.27□□□□□ -0.29
TROAP-211ENST00000549891 PCDHGB7Q9Y5F8 929 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 UTP20O75691 2785 aaKnown RBP13.27□□□□□ -0.29
TROAP-211ENST00000549891 LOC285095A0A1B0GVY8 99 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 OR2AG2A6NM03 316 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 AKR1B10O60218 316 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 PDGFAP04085 211 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 PYGMP11217 842 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 MSH3P20585 1137 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 LPOP22079 712 aaPredicted RBP13.26□□□□□ -0.29
TROAP-211ENST00000549891 AKT1P31749 480 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 SLC1A1P43005 524 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 WNT3AP56704 352 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 GSDMDP57764 484 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 TFDP2Q14188 446 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 NFE2L1Q14494 772 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 PRKD1Q15139 912 aaPredicted RBP13.26□□□□□ -0.29
TROAP-211ENST00000549891 CHRNA6Q15825 494 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 IZUMO3Q5VZ72 239 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 METRNLQ641Q3 311 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 CAPRIN2Q6IMN6 1127 aaKnown RBP13.26□□□□□ -0.29
TROAP-211ENST00000549891 FAM199XQ6PEV8 388 aaPredicted RBP13.26□□□□□ -0.29
TROAP-211ENST00000549891 FAM151BQ6UXP7 276 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 RHOT1Q8IXI2 618 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 TTC30BQ8N4P2 665 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 MR1Q95460 341 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 RNF25Q96BH1 459 aaPredicted RBP13.26□□□□□ -0.29
TROAP-211ENST00000549891 VAT1Q99536 393 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 ING2Q9H160 280 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 LATS2Q9NRM7 1088 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 KCND1Q9NSA2 647 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
TROAP-211ENST00000549891 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 ACSL5Q9ULC5 683 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 ZNF451Q9Y4E5 1061 aa13.26□□□□□ -0.29
TROAP-211ENST00000549891 SHANK1Q9Y566 2161 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 TEX15Q9BXT5 2789 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 SSU72P8A0A1W2PR75 194 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 ARGFXA6NJG6 315 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 UGT1A9O60656 530 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 UGT1A6P19224 532 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 HLA-DPA1P20036 260 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 UGT1A1P22309 533 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 UGT1A4P22310 534 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 GNLYP22749 145 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 VARSP26640 1264 aaKnown RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 PBLDP30039 288 aaPredicted RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 CCL11P51671 97 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 CTSCP53634 463 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 RPS18P62269 152 aaKnown RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 PRKAA1Q13131 559 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 SLC1A5Q15758 541 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 SIRPB2Q5JXA9 342 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 FAM182AQ5T1J6 154 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 GPRC6AQ5T6X5 926 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 PAPD7Q5XG87 772 aaKnown RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 ZNF517Q6ZMY9 492 aaPredicted RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 FAM83HQ6ZRV2 1179 aaPredicted RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 HPS6Q86YV9 775 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 SLC25A41Q8N5S1 370 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 BLOC1S5Q8TDH9 187 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 CPT1BQ92523 772 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 C12orf66Q96MD2 445 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 LRFN5Q96NI6 719 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 AKIRIN1Q9H9L7 192 aaPredicted RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 UGT1A7Q9HAW7 530 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 UGT1A10Q9HAW8 530 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 UGT1A8Q9HAW9 530 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 MLXIPLQ9NP71 852 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 SMOXQ9NWM0 555 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 SOHLH2Q9NX45 425 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 IFNKQ9P0W0 207 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 KLHL8Q9P2G9 620 aaPredicted RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 PLEKHB1Q9UF11 243 aaPredicted RBP13.25□□□□□ -0.29
TROAP-211ENST00000549891 SNX7Q9UNH6 387 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 COLEC10Q9Y6Z7 277 aa13.25□□□□□ -0.29
TROAP-211ENST00000549891 SPTBP11277 2137 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 MGAT4DA6NG13 374 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 MATN2O00339 956 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 MAP3K7O43318 606 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 DPM1O60762 260 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 RAB40ALP0C0E4 278 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 SLC35G4P0C7Q5 338 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 NFKB1P19838 968 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 NDUFS1P28331 727 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 CD68P34810 354 aaPredicted RBP13.24□□□□□ -0.29
TROAP-211ENST00000549891 UQCRFS1P47985 274 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 MPP3Q13368 585 aa13.24□□□□□ -0.29
TROAP-211ENST00000549891 IL10RAQ13651 578 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms