RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ZNF77Q15935 545 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 DCAF4L1Q3SXM0 396 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 WDR45BQ5MNZ6 344 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3GQ6DHY5 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 CENPPQ6IPU0 288 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3CQ6IPX1 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 SHC4Q6S5L8 630 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ZNF793Q6ZN11 406 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 RAB11FIP2Q7L804 512 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 RFX6Q8HWS3 928 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 EXOC8Q8IYI6 725 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3Q8IZP1 549 aaPredicted RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 OR4N4Q8N0Y3 316 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TMTC2Q8N394 836 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ENGASEQ8NFI3 743 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 CCDC148Q8NFR7 591 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 BICD2Q8TD16 824 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 KCNE4Q8WWG9 221 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 RUFY2Q8WXA3 655 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TRMT61AQ96FX7 289 aaKnown RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 P2RY11Q96G91 374 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 CNDP2Q96KP4 475 aaKnown RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 ZNF778Q96MU6 729 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 SIGLEC11Q96RL6 698 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ACOX2Q99424 681 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 CDT1Q9H211 546 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 VPS16Q9H269 839 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 KIF9Q9HAQ2 790 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 LIN7CQ9NUP9 197 aaKnown RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 SLC38A7Q9NVC3 462 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 SLC12A4Q9UP95 1085 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 B3GNT3Q9Y2A9 372 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 SLCO1B1Q9Y6L6 691 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TP53BP1Q12888 1972 aaPredicted RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 TRIP11Q15643 1979 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ESYT2A0FGR8 921 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 SLC22A23A1A5C7 686 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 C2CD4BA6NLJ0 364 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 BCAT2O15382 392 aaPredicted RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 TNFSF14O43557 240 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 PEX14O75381 377 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 LDHAP00338 332 aaKnown RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 CENPBP07199 599 aaPredicted RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 CXCL8P10145 99 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 ODC1P11926 461 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 TFEBP19484 476 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 ACAT1P24752 427 aaKnown RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 LMO1P25800 156 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 LIFRP42702 1097 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 SLC37A1P57057 533 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 TAS2R50P59544 299 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 RPL15P61313 204 aaKnown RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 AP2B1P63010 937 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 PPP2R5CQ13362 524 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 SMAD1Q15797 465 aaKnown RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 IGFBP7Q16270 282 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 PDCD2Q16342 344 aaPredicted RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 KIF19Q2TAC6 998 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 TMEM88Q6PEY1 159 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 RINLQ6ZS11 566 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 GLRX5Q86SX6 157 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 TMEM150AQ86TG1 271 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 CHD1LQ86WJ1 897 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 ERICH1Q86X53 443 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 ANKRD13BQ86YJ7 626 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 SCN4BQ8IWT1 228 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 C4orf19Q8IY42 314 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 EID2Q8N6I1 236 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 NANOGP1Q8N7R0 232 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 LSM14AQ8ND56 463 aaKnown RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 ZNF248Q8NDW4 579 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 FGF11Q92914 225 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 MED8Q96G25 268 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 EIF2AK1Q9BQI3 630 aaKnown RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 MECRQ9BV79 373 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 C1QTNF7Q9BXJ2 289 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 TMEM120AQ9BXJ8 343 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 FZD8Q9H461 694 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 FAM124BQ9H5Z6 455 aaPredicted RBP4.35□□□□□ -1.71
CBX5-203ENST00000547872 MLXIPLQ9NP71 852 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 TMEM184CQ9NVA4 438 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 KCNJ14Q9UNX9 436 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 CNTN6Q9UQ52 1028 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 ASB3Q9Y575 518 aa4.35□□□□□ -1.71
CBX5-203ENST00000547872 TCHHQ07283 1943 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 PLXND1Q9Y4D7 1925 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 MYO18BQ8IUG5 2567 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 ARHGEF35A5YM69 484 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM90A18PA6NE21 464 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM90A16PA6NEW6 464 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM47DPA6NHR8 397 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 OR6C75A6NL08 312 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM90A9PA6NNJ1 464 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM90A5PA8MXJ8 464 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 WASH3PC4AMC7 463 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 CNTN5O94779 1100 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 LDOC1O95751 146 aaPredicted RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM90A15PP0C7V4 464 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms