RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 IWS1Q96ST2 819 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 PKP4Q99569 1192 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 PIMREGQ9BSJ6 248 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 PCGF1Q9BSM1 259 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 INPP5KQ9BT40 448 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 CACNG6Q9BXT2 260 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 KCNK15Q9H427 330 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 CHMP1AQ9HD42 196 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 WDR6Q9NNW5 1121 aaKnown RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TUFT1Q9NNX1 390 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 IARS2Q9NSE4 1012 aaKnown RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TAS2R14Q9NYV8 317 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 CNIH4Q9P003 139 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TRPC4Q9UBN4 977 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 XPO7Q9UIA9 1087 aaKnown RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ITGA11Q9UKX5 1188 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ATP6V0A2Q9Y487 856 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 NFS1Q9Y697 457 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 AP1M2Q9Y6Q5 423 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 A3GALT2U3KPV4 340 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 GRIN2BQ13224 1484 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ABCA5Q8WWZ7 1642 aa4.21□□□□□ -1.73
SCAF11-210ENST00000547654 TRBV5-3A0A0A0MS03 114 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 A0A0B4J293 547 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 KANSL1LA0AUZ9 987 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 SLC22A23A1A5C7 686 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 CLIC2O15247 247 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 GH2P01242 217 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 KLKB1P03952 638 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 LINGO3P0C6S8 592 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 PRLRP16471 622 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 SRD5A1P18405 259 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 CRKLP46109 303 aaKnown RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF75DP51815 510 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 LUMP51884 338 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 HSPA2P54652 639 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 RBPJQ06330 500 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 HSPB3Q12988 150 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 MTA1Q13330 715 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 MTX1Q13505 466 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 PTPRCAPQ14761 206 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ARHGEF6Q15052 776 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 PGM5Q15124 567 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 PNLIPRP3Q17RR3 467 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 MYLK3Q32MK0 819 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 FUT11Q495W5 492 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 SYTL3Q4VX76 610 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 SLC39A12Q504Y0 691 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ALG10Q5BKT4 473 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ALG10BQ5I7T1 473 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 DNTTIP2Q5QJE6 756 aaKnown RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 FBXO46Q6PJ61 603 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF793Q6ZN11 406 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 RBM44Q6ZP01 1051 aaKnown RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 KCTD9Q7L273 389 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 DET1Q7L5Y6 550 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 RABEPKQ7Z6M1 372 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ADCK1Q86TW2 530 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 TSPAN33Q86UF1 283 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 NOXA1Q86UR1 476 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 SLC35F3Q8IY50 421 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 MAML2Q8IZL2 1156 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 PELI3Q8N2H9 469 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 KDM1BQ8NB78 822 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 LPCAT1Q8NF37 534 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 OR7G3Q8NG95 312 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 GRAPLQ8TC17 118 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 IGSF8Q969P0 613 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 SLC41A2Q96JW4 573 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 RUFY1Q96T51 708 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 FAM110AQ9BQ89 295 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 TASP1Q9H6P5 420 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 TMEM206Q9H813 350 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ACTR3BQ9P1U1 418 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 STK26Q9P289 416 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 LARSQ9P2J5 1176 aaKnown RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 TBK1Q9UHD2 729 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 TSPYL4Q9UJ04 414 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 CPSF3Q9UKF6 684 aaKnown RBP4.21□□□□□ -1.74
SCAF11-210ENST00000547654 SNX7Q9UNH6 387 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 IKBKGQ9Y6K9 419 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 ADAMTS12P58397 1594 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 CUL7Q14999 1698 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 KIAA0586Q9BVV6 1533 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 MST1RQ04912 1400 aa4.21□□□□□ -1.74
SCAF11-210ENST00000547654 GRIN2AQ12879 1464 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 A0A0U1RQF3 1178 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 CPED1A4D0V7 1026 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 DDTLA6NHG4 134 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 PLOD2O00469 737 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 MAP2K7O14733 419 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 EIF3DO15371 548 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 PRAMEF11O60813 436 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 NOL3O60936 208 aaKnown RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 DDHD2O94830 711 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 REC8O95072 547 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 MOCS3O95396 460 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 RLN1P04808 185 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 TPM2P07951 284 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms