RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 JUPP14923 745 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 PNLIPP16233 465 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 ALDH4A1P30038 563 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 CCL7P80098 99 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 INSM1Q01101 510 aaPredicted RBP16.5■□□□□ 0.23
LTBR-215ENST00000546296 GUCY2DQ02846 1103 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 GSTM4Q03013 218 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 HHEXQ03014 270 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 CRYMQ14894 314 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 ZNF470Q6ECI4 717 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 LRRC6Q86X45 466 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 GALNT15Q8N3T1 639 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 AVL9Q8NBF6 648 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 NOA1Q8NC60 698 aaKnown RBP16.5■□□□□ 0.23
LTBR-215ENST00000546296 GABPB2Q8TAK5 448 aaPredicted RBP16.5■□□□□ 0.23
LTBR-215ENST00000546296 CALML6Q8TD86 181 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 ART4Q93070 314 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 SH3KBP1Q96B97 665 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 SLC38A3Q99624 504 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 WWP1Q9H0M0 922 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 PPANQ9NQ55 473 aaKnown RBP16.5■□□□□ 0.23
LTBR-215ENST00000546296 CPNE7Q9UBL6 633 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 RABGEF1Q9UJ41 708 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 VPS9D1Q9Y2B5 631 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 TEX264Q9Y6I9 313 aa16.5■□□□□ 0.23
LTBR-215ENST00000546296 TOP3BO95985 862 aaKnown RBP16.49■□□□□ 0.23
LTBR-215ENST00000546296 RPLP0P05388 317 aaKnown RBP16.49■□□□□ 0.23
LTBR-215ENST00000546296 SLC35G4P0C7Q5 338 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 BRAFP15056 766 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 ITGB6P18564 788 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 OGNP20774 298 aaKnown RBP16.49■□□□□ 0.23
LTBR-215ENST00000546296 EIF3BP55884 814 aaKnown RBP16.49■□□□□ 0.23
LTBR-215ENST00000546296 CLDN6P56747 220 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 OR1D5P58170 312 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 CLCA4Q14CN2 919 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 BRD3Q15059 726 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 TRADDQ15628 312 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 AMZ1Q400G9 498 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 SYTL3Q4VX76 610 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 GLE1Q53GS7 698 aaKnown RBP16.49■□□□□ 0.23
LTBR-215ENST00000546296 HSP90AA5PQ58FG0 334 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 HES3Q5TGS1 186 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 KCNMB4Q86W47 210 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 TMPRSS12Q86WS5 348 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 CILP2Q8IUL8 1156 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 ZBED8Q8IZ13 594 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 FBXO36Q8NEA4 188 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 WDR48Q8TAF3 677 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 ELMO1Q92556 727 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 FAM167BQ9BTA0 163 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 COG4Q9H9E3 785 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 SARS2Q9NP81 518 aaKnown RBP16.49■□□□□ 0.23
LTBR-215ENST00000546296 SAYSD1Q9NPB0 183 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 IARS2Q9NSE4 1012 aaKnown RBP16.49■□□□□ 0.23
LTBR-215ENST00000546296 GNPTGQ9UJJ9 305 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 WDR37Q9Y2I8 494 aa16.49■□□□□ 0.23
LTBR-215ENST00000546296 CACNA1AO00555 2505 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 SPTBN2O15020 2390 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 ESYT3A0FGR9 886 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 OR52A4PA6NMU1 304 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 MT-CO3P00414 261 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 ERVK-10P10266 1014 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 XRCC1P18887 633 aaPredicted RBP16.48■□□□□ 0.23
LTBR-215ENST00000546296 SPINK2P20155 84 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 FMO4P31512 558 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 SLC19A1P41440 591 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 GPR3P46089 330 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 FASLGP48023 281 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 CTBP1Q13363 440 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 SPIDRQ14159 915 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 KRT33BQ14525 404 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 RPE65Q16518 533 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 TYSND1Q2T9J0 566 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 UNC5AQ6ZN44 842 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 TMPRSS7Q7RTY8 843 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 SPRED1Q7Z699 444 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 PALM2Q8IXS6 379 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 LMNTD2Q8IXW0 634 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 UNC5BQ8IZJ1 945 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 LILRA3Q8N6C8 439 aaPredicted RBP16.48■□□□□ 0.23
LTBR-215ENST00000546296 PYROXD1Q8WU10 500 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 GFM1Q96RP9 751 aaKnown RBP16.48■□□□□ 0.23
LTBR-215ENST00000546296 SCNM1Q9BWG6 230 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.48■□□□□ 0.23
LTBR-215ENST00000546296 P2RY12Q9H244 342 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 LRRN3Q9H3W5 708 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 EPB41L5Q9HCM4 733 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 IMP3Q9NV31 184 aaKnown RBP16.48■□□□□ 0.23
LTBR-215ENST00000546296 INTS10Q9NVR2 710 aaKnown RBP16.48■□□□□ 0.23
LTBR-215ENST00000546296 KCNK4Q9NYG8 393 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 ZNF624Q9P2J8 865 aaPredicted RBP16.48■□□□□ 0.23
LTBR-215ENST00000546296 CLCA2Q9UQC9 943 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 CRYL1Q9Y2S2 319 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 PLXNB3Q9ULL4 1909 aa16.48■□□□□ 0.23
LTBR-215ENST00000546296 FAM149AA5PLN7 773 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 IQCF5A8MTL0 148 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 E7ESA3 106 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 IFRD1O00458 451 aaPredicted RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 LIN7AO14910 233 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms