RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 AGAP14A8MT82 685 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 KATNA1O75449 491 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 POP7O75817 140 aaKnown RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 MT-ND3P03897 115 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 NTRK1P04629 796 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 ZFXP17010 805 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 PTPN4P29074 926 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 RORAP35398 523 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 ARHGAP25P42331 645 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 KPNA2P52292 529 aaKnown RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 DYNLT1P63172 113 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 ABRQ12979 859 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 CHAF1BQ13112 559 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 PTPRCAPQ14761 206 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 SLC1A5Q15758 541 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 HIST2H2BCQ6DN03 193 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 FAM198BQ6UWH4 519 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 FAM151BQ6UXP7 276 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 AMZ2Q86W34 360 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 RHOT1Q8IXI2 618 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 ZNF567Q8N184 647 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 LILRA3Q8N6C8 439 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 BEND7Q8N7W2 519 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 Q8NA96 180 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 SIDT2Q8NBJ9 832 aaKnown RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 BRSK1Q8TDC3 778 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 RMDN2Q96LZ7 410 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 QKIQ96PU8 341 aaKnown RBP eCLIP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 FCRL5Q96RD9 977 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 SRPK1Q96SB4 655 aaKnown RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 INSM2Q96T92 566 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 CHP1Q99653 195 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 LATS2Q9NRM7 1088 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 SPTLC3Q9NUV7 552 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 RARRES3Q9UL19 164 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 PSMD13Q9UNM6 376 aa12.26□□□□□ -0.45
COPS7A-221ENST00000546229 DNMT3AQ9Y6K1 912 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 RP1L1Q8IWN7 2480 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-221ENST00000546229 PCM1Q15154 2024 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 GLYATL1P3A0A0U1RQE8 302 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 PIPSLA2A3N6 862 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 OR2AG2A6NM03 316 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 BUD23O43709 281 aaKnown RBP12.25□□□□□ -0.45
COPS7A-221ENST00000546229 VCLP18206 1134 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 LPOP22079 712 aaPredicted RBP12.25□□□□□ -0.45
COPS7A-221ENST00000546229 PTGIRP43119 386 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 MARCKSL1P49006 195 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 NR2C2P49116 596 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 TUBB4BP68371 445 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 XIAPP98170 497 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 TUBB2AQ13885 445 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 GPR19Q15760 415 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 NADK2Q4G0N4 442 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 BCL7AQ4VC05 210 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 LDLRAP1Q5SW96 308 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 PRAMEF17Q5VTA0 474 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 FAM69BQ5VUD6 431 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 IZUMO3Q5VZ72 239 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 MICALCLQ6ZW33 695 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 SYVN1Q86TM6 617 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 RFX6Q8HWS3 928 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 CARFQ8N187 725 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 TEX19Q8NA77 164 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 GALNT11Q8NCW6 608 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.25□□□□□ -0.45
COPS7A-221ENST00000546229 LINC00615Q96LM1 132 aaPredicted RBP12.25□□□□□ -0.45
COPS7A-221ENST00000546229 LRFN5Q96NI6 719 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 NRTNQ99748 197 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 TUBB2BQ9BVA1 445 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 GPR87Q9BY21 358 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 KIR3DX1Q9H7L2 352 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 PDE7BQ9NP56 450 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 SLC24A2Q9UI40 661 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 MAP4K5Q9Y4K4 846 aa12.25□□□□□ -0.45
COPS7A-221ENST00000546229 CFAP20Q9Y6A4 193 aaKnown RBP12.25□□□□□ -0.45
COPS7A-221ENST00000546229 hCG_1818297A0A087WSY0 165 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 H3BMH7 237 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 CPNE3O75131 537 aaKnown RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 MSL3P1P0C860 447 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 HLA-DPA1P20036 260 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 COMTP21964 271 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 GNLYP22749 145 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 ADRA1AP35348 466 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 HALP42357 657 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 HSD11B2P80365 405 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 ACY1Q03154 408 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 OLIG2Q13516 323 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 GTF2H3Q13889 308 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 PRR30Q53SZ7 412 aaPredicted RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 DNTTIP2Q5QJE6 756 aaKnown RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 PLEKHS1Q5SXH7 462 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 ZDHHC20Q5W0Z9 365 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 ZNF385CQ66K41 422 aaPredicted RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 CYB5D1Q6P9G0 228 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 FBXO38Q6PIJ6 1188 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 TMEM220Q6QAJ8 160 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 SPOCD1Q6ZMY3 1216 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms