RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 RPLP0P05388 317 aaKnown RBP17.16■□□□□ 0.34
CD9-211ENST00000546073 XRCC1P18887 633 aaPredicted RBP17.16■□□□□ 0.34
CD9-211ENST00000546073 ELK3P41970 407 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 FASLGP48023 281 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 EIF3BP55884 814 aaKnown RBP17.16■□□□□ 0.34
CD9-211ENST00000546073 GPLD1P80108 840 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 MRPS25P82663 173 aaKnown RBP17.16■□□□□ 0.34
CD9-211ENST00000546073 GUCY2DQ02846 1103 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 ILF2Q12905 390 aaKnown RBP17.16■□□□□ 0.34
CD9-211ENST00000546073 NFE2L1Q14494 772 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 CLPPQ16740 277 aaPredicted RBP17.16■□□□□ 0.34
CD9-211ENST00000546073 AMZ1Q400G9 498 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 MAP9Q49MG5 647 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 HES3Q5TGS1 186 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 METRNLQ641Q3 311 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 ZNF470Q6ECI4 717 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 TTC23LQ6PF05 361 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 PIM3Q86V86 326 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 ZBED8Q8IZ13 594 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 ASZ1Q8WWH4 475 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 CDKL2Q92772 493 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 LRRC1Q9BTT6 524 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 CARD6Q9BX69 1037 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 STRADBQ9C0K7 418 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 LRRN3Q9H3W5 708 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 CAAP1Q9H8G2 361 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 IMP3Q9NV31 184 aaKnown RBP17.16■□□□□ 0.34
CD9-211ENST00000546073 TXNDC16Q9P2K2 825 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 CHMP2BQ9UQN3 213 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 CABIN1Q9Y6J0 2220 aa17.16■□□□□ 0.34
CD9-211ENST00000546073 CEP250Q9BV73 2442 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 GOLGA8KD6RF30 607 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 GOLGA8TH3BQL2 631 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 DUX1O43812 170 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 MT-CO3P00414 261 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 ESR1P03372 595 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 RPN2P04844 631 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 PRSS56P0CW18 603 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 AMD1P17707 334 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 CHRM3P20309 590 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 B4GALNT1Q00973 533 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 BOP1Q14137 746 aaKnown RBP17.15■□□□□ 0.34
CD9-211ENST00000546073 CRYMQ14894 314 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 PLCL1Q15111 1095 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 OTOAQ7RTW8 1153 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
CD9-211ENST00000546073 CCDC25Q86WR0 208 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 C12orf66Q96MD2 445 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 FOPNLQ96NB1 174 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 TMEM74Q96NL1 305 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 COG4Q9H9E3 785 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 TOR4AQ9NXH8 423 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 NSMCE4AQ9NXX6 385 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 PSMD13Q9UNM6 376 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 COMMD10Q9Y6G5 202 aa17.15■□□□□ 0.34
CD9-211ENST00000546073 COL5A1P20908 1838 aaPredicted RBP17.14■□□□□ 0.34
CD9-211ENST00000546073 HYAL3O43820 417 aaPredicted RBP17.14■□□□□ 0.33
CD9-211ENST00000546073 RPS3P23396 243 aaKnown RBP eCLIP17.14■□□□□ 0.33
CD9-211ENST00000546073 FMO4P31512 558 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 MAPK9P45984 424 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 CD151P48509 253 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 EPHA4P54764 986 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 SLC7A5Q01650 507 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 SMAD1Q15797 465 aaKnown RBP17.14■□□□□ 0.33
CD9-211ENST00000546073 TTLL9Q3SXZ7 439 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 HP1BP3Q5SSJ5 553 aaPredicted RBP17.14■□□□□ 0.33
CD9-211ENST00000546073 PERM1Q5SV97 790 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 UGT3A1Q6NUS8 523 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 ARMC6Q6NXE6 501 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 TMPRSS7Q7RTY8 843 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 C11orf96Q7Z7L8 435 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 LDB1Q86U70 411 aaPredicted RBP17.14■□□□□ 0.33
CD9-211ENST00000546073 CILP2Q8IUL8 1156 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 ANKMY2Q8IV38 441 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 CACTIN-AS1Q8N1I8 211 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 FBXO36Q8NEA4 188 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 SKA2Q8WVK7 121 aaPredicted RBP17.14■□□□□ 0.33
CD9-211ENST00000546073 ZFPM2Q8WW38 1151 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 WWP1Q9H0M0 922 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 SAYSD1Q9NPB0 183 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 IARS2Q9NSE4 1012 aaKnown RBP17.14■□□□□ 0.33
CD9-211ENST00000546073 ZFATQ9P243 1243 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 NEUROG3Q9Y4Z2 214 aa17.14■□□□□ 0.33
CD9-211ENST00000546073 TDRD6O60522 2096 aaKnown RBP17.13■□□□□ 0.33
CD9-211ENST00000546073 LY6G6EA0A0G2JKS1 128 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 OR1I1O60431 355 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 CPNE6O95741 557 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 ITGB6P18564 788 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 CA5AP35218 305 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 ARCN1P48444 511 aaKnown RBP17.13■□□□□ 0.33
CD9-211ENST00000546073 TUBB4BP68371 445 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 CCL7P80098 99 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 INSM1Q01101 510 aaPredicted RBP17.13■□□□□ 0.33
CD9-211ENST00000546073 BRD3Q15059 726 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 HSP90AA5PQ58FG0 334 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 KIAA0408Q6ZU52 694 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 SPRED1Q7Z699 444 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 C17orf82Q86X59 251 aaPredicted RBP17.13■□□□□ 0.33
CD9-211ENST00000546073 IFT20Q8IY31 132 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 RAB42Q8N4Z0 105 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms