RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GOLGA7Q7Z5G4 137 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 ITFG1Q8TB96 612 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 ZNF382Q96SR6 550 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 MUC13Q9H3R2 512 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 FANCEQ9HB96 536 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 PLGRKTQ9HBL7 147 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 FARSBQ9NSD9 589 aaKnown RBP15.58■□□□□ 0.08
LDLR-204ENST00000545707 VAPAQ9P0L0 249 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 ZNF639Q9UID6 485 aa15.58■□□□□ 0.08
LDLR-204ENST00000545707 TYW5A2RUC4 315 aaKnown RBP15.57■□□□□ 0.08
LDLR-204ENST00000545707 LSM1O15116 133 aaKnown RBP15.57■□□□□ 0.08
LDLR-204ENST00000545707 NOBOXO60393 691 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 F11P03951 625 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 IRF1P10914 325 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 IL7RP16871 459 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 ZNF182P17025 639 aaPredicted RBP15.57■□□□□ 0.08
LDLR-204ENST00000545707 PIGFQ07326 219 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 TWF1Q12792 350 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 RTP2Q5QGT7 225 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 MFSD14CQ5VZR4 134 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 FRA10AC1Q70Z53 315 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 PROSER1Q86XN7 944 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 TANKQ92844 425 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 WBP2Q969T9 261 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 EID2BQ96D98 161 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 C17orf80Q9BSJ5 609 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 TBCDQ9BTW9 1192 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 ADNPQ9H2P0 1102 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 IKZF5Q9H5V7 419 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 NSUN3Q9H649 340 aaKnown RBP15.57■□□□□ 0.08
LDLR-204ENST00000545707 NEUROG3Q9Y4Z2 214 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 KANSL1LA0AUZ9 987 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 SEPT4O43236 478 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 KDELR3O43731 214 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 RHOCP08134 193 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 CKBP12277 381 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 CDH1P12830 882 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 SLC2A4P14672 509 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 ATF6P18850 670 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 DCKP27707 260 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 MTHFRP42898 656 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 HSPA7P48741 367 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 FLT3LGP49771 235 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 CLCN7P51798 805 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 SGO1Q5FBB7 561 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 CCNYL2Q5T2Q4 361 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 PRSS55Q6UWB4 352 aaPredicted RBP15.57■□□□□ 0.08
LDLR-204ENST00000545707 EFL1Q7Z2Z2 1120 aaKnown RBP15.57■□□□□ 0.08
LDLR-204ENST00000545707 RASAL3Q86YV0 1011 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 ZNF583Q96ND8 569 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 ING2Q9H160 280 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 IPPKQ9H8X2 491 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 PCDHB3Q9Y5E6 796 aa15.57■□□□□ 0.08
LDLR-204ENST00000545707 PLXNA3P51805 1871 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 MOXD2PA6NHM9 499 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ANKRD28O15084 1053 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 INPPL1O15357 1258 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ALPIP09923 528 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 C7P10643 843 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 HLCSP50747 726 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 RPL38P63173 70 aaKnown RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 HMGCS1Q01581 520 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 GTF2H2Q13888 395 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 SPATS1Q496A3 300 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 RNF219Q5W0B1 726 aaPredicted RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 GTF2H2CQ6P1K8 395 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 TMEM173Q86WV6 379 aaPredicted RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 IFNL1Q8IU54 200 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ZC3H7AQ8IWR0 971 aaKnown RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 CLDN19Q8N6F1 224 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 BPIFB6Q8NFQ5 453 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 OR10A6Q8NH74 314 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 TBC1D15Q8TC07 691 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 BOCQ9BWV1 1114 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ZFP14Q9HCL3 533 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 PCDHB9Q9Y5E1 797 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 GOLGA8CPA6NN73 597 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ADAM12O43184 909 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 EOMESO95936 686 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ALPLP05186 524 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 RPL17P18621 184 aaKnown RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 NR4A1P22736 598 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ATP5C1P36542 298 aaKnown RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 MRPL19P49406 292 aaKnown RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 CDH4P55283 916 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 MRPL58Q14197 206 aaKnown RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 IMPG1Q17R60 797 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 TTC30BQ8N4P2 665 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 DPP10Q8N608 796 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 PDZD8Q8NEN9 1154 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 OR10Q1Q8NGQ4 319 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 OR6K2Q8NGY2 324 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 CLHC1Q8NHS4 586 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 KCNJ9Q92806 393 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 BHMTQ93088 406 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 THUMPD3Q9BV44 507 aaKnown RBP15.56■□□□□ 0.08
LDLR-204ENST00000545707 TOR3AQ9H497 397 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 HEBP1Q9NRV9 189 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 ELOVL2Q9NXB9 296 aa15.56■□□□□ 0.08
LDLR-204ENST00000545707 MAGEL2Q9UJ55 1249 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms