RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 EXT2Q93063 718 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 FUBP1Q96AE4 644 aaKnown RBP13.55□□□□□ -0.24
SCARB1-209ENST00000545305 TMEM159Q96B96 161 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 PTERQ96BW5 349 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 CCDC126Q96EE4 140 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 UHRF1Q96T88 793 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-209ENST00000545305 MECRQ9BV79 373 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 FAM126AQ9BYI3 521 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-209ENST00000545305 NSRP1Q9H0G5 558 aaKnown RBP13.55□□□□□ -0.24
SCARB1-209ENST00000545305 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 PSD3Q9NYI0 1048 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 SIRPGQ9P1W8 387 aa13.55□□□□□ -0.24
SCARB1-209ENST00000545305 MBD1Q9UIS9 605 aaPredicted RBP13.55□□□□□ -0.24
SCARB1-209ENST00000545305 KLHL33A6NCF5 533 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 PABPN1LA6NDY0 278 aaKnown RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 TCP11X1B4DZS4 312 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 SUPT3HB4E1H0 165 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 G3V2L1 256 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 TOR1BO14657 336 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 LIN7AO14910 233 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 NUAK1O60285 661 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 KERAO60938 352 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 SUPT3HO75486 399 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 S100BP04271 92 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 IGHV4-34P06331 123 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 HOXC4P09017 264 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 TPBGLP0DKB5 382 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 MPC1LP0DKB6 136 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 AOC1P19801 751 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 BGNP21810 368 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 KCNA4P22459 653 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 HTR1BP28222 390 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 OR4D1Q15615 310 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 TSNQ15631 228 aaKnown RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 NAPRTQ6XQN6 538 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 SLC36A4Q6YBV0 504 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 RGS9BPQ6ZS82 235 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 PIWIL4Q7Z3Z4 852 aaKnown RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 ISCA2Q86U28 154 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 SLC22A9Q8IVM8 553 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 C10orf107Q8IVU9 208 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 SPNS2Q8IVW8 549 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 HM13Q8TCT9 377 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 ZNF75CPQ92670 426 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 GLMNQ92990 594 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 LINC00615Q96LM1 132 aaPredicted RBP13.54□□□□□ -0.24
SCARB1-209ENST00000545305 LGR4Q9BXB1 951 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 FAM8A1Q9UBU6 413 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 TMCO1Q9UM00 188 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 HS3ST3A1Q9Y663 406 aa13.54□□□□□ -0.24
SCARB1-209ENST00000545305 C17orf113A0A1B0GUU1 675 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 GMNCA6NCL1 334 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 K7ESF4 209 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 CDC7O00311 574 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 KLF11O14901 512 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 CHUKO15111 745 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 KMOO15229 486 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 GRID2O43424 1007 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 RRP9O43818 475 aaKnown RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 TRIM13O60858 407 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 LILRB5O75023 590 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 PDGFBP01127 241 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 SERPINE1P05121 402 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 VCLP18206 1134 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 GRK2P25098 689 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 MAPK9P45984 424 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 THOP1P52888 689 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 CLDN2P57739 230 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 YPEL5P62699 121 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 PLOD1Q02809 727 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 GABPB1Q06547 395 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 GBX1Q14549 363 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 NFATC4Q14934 902 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 PLA2G4EQ3MJ16 856 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 LIPMQ5VYY2 423 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 GCNT7Q6ZNI0 430 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 NEK10Q6ZWH5 1172 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 RAB44Q7Z6P3 723 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 GPSM1Q86YR5 675 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 FAM160A2Q8N612 972 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 BIRC7Q96CA5 298 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 EPN3Q9H201 632 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 OXSMQ9NWU1 459 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 DLGAP2Q9P1A6 1054 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 MOSPD1Q9UJG1 213 aa13.53□□□□□ -0.24
SCARB1-209ENST00000545305 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 DNMT3AQ9Y6K1 912 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-209ENST00000545305 POM121BA6NF01 834 aa13.52□□□□□ -0.25
SCARB1-209ENST00000545305 MGAT4DA6NG13 374 aa13.52□□□□□ -0.25
SCARB1-209ENST00000545305 TMEM221A6NGB7 291 aa13.52□□□□□ -0.25
SCARB1-209ENST00000545305 A8MT66 165 aa13.52□□□□□ -0.25
SCARB1-209ENST00000545305 MEI4A8MW99 385 aa13.52□□□□□ -0.25
SCARB1-209ENST00000545305 C10orf142B7Z368 130 aa13.52□□□□□ -0.25
SCARB1-209ENST00000545305 M0R296 226 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms