RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CCDC89Q8N998 374 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 Q8N9G6 341 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 AVL9Q8NBF6 648 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 OR4K2Q8NGD2 314 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 MDM1Q8TC05 714 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF398Q8TD17 642 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 C1orf54Q8WWF1 131 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ATG4AQ8WYN0 398 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 RTP4Q96DX8 246 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 TLR10Q9BXR5 811 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ARFGAP3Q9NP61 516 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 PAK5Q9P286 719 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 DRG1Q9Y295 367 aaKnown RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 PRKAB1Q9Y478 270 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 JRKLQ9Y4A0 524 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 PLEKHM1Q9Y4G2 1056 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ARL5AQ9Y689 179 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 RNF215Q9Y6U7 377 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF106Q9H2Y7 1883 aaKnown RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 CHD6Q8TD26 2715 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 KIR2DS5A0A0G2JLQ3 304 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 A0A0G2JNG1 304 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 KIR2DS3K7RE56 304 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A9O60656 530 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SNX2O60749 519 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 MTX2O75431 263 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 KRT37O76014 449 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SRP72O76094 671 aaKnown RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PRAMEF1O95521 474 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 AP2A1O95782 977 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PF4P02776 101 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 CAPNS1P04632 268 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 RALBP11234 206 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 F3P13726 295 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF7P17097 686 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A6P19224 532 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 MSH3P20585 1137 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A1P22309 533 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A4P22310 534 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ALDH4A1P30038 563 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 DNAJA1P31689 397 aaKnown RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A3P35503 534 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A5P35504 534 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 GPR3P46089 330 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 FASLGP48023 281 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 LSSP48449 732 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PPM1FP49593 454 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 MAZP56270 477 aaKnown RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 CDH17Q12864 832 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 OLIG2Q13516 323 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 LAMB3Q13751 1172 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 KIR2DS5Q14953 304 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 CLPPQ16740 277 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 HP1BP3Q5SSJ5 553 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF648Q5T619 568 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 DENND5AQ6IQ26 1287 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 CRTC3Q6UUV7 619 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 LYPD4Q6UWN0 246 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PPP1R21Q6ZMI0 780 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 GSTA5Q7RTV2 222 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SPRED1Q7Z699 444 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SLC9B2Q86UD5 537 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PIM3Q86V86 326 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 TRAPPC5Q8IUR0 188 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 DNAAF3Q8N9W5 541 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 HEXDCQ8WVB3 486 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PATE1Q8WXA2 126 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SH3KBP1Q96B97 665 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ULK4Q96C45 1275 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF514Q96K75 400 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PBKQ96KB5 322 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 NAP1L3Q99457 506 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SLC38A3Q99624 504 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 DPYSL5Q9BPU6 564 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 TIMM29Q9BSF4 260 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 STRADBQ9C0K7 418 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 OSGEPL1Q9H4B0 414 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ASB8Q9H765 288 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 POLR1BQ9H9Y6 1135 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A7Q9HAW7 530 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A10Q9HAW8 530 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 UGT1A8Q9HAW9 530 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 KLC4Q9NSK0 619 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SMOXQ9NWM0 555 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 KCNK6Q9Y257 313 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 PCDHB1Q9Y5F3 818 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ENTPD2Q9Y5L3 495 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 ST14Q9Y5Y6 855 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 SLC30A1Q9Y6M5 507 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 MAP1BP46821 2468 aaKnown RBP7.26□□□□□ -1.25
CPSF7-224ENST00000544990 CACNA1GO43497 2377 aa7.26□□□□□ -1.25
CPSF7-224ENST00000544990 TRBV23OR9-2A0A075B6M9 112 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 CCDC187A0A096LP49 1063 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 A0A1W2PQM1 296 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 KLHL33A6NCF5 533 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SRRM3A6NNA2 597 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SHISA8B8ZZ34 492 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 D6RAR5 112 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 AP3B1O00203 1094 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms