RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NAGLUP54802 743 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 HSPA14Q0VDF9 509 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 ANO7Q6IWH7 933 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 ADAMTSL2Q86TH1 951 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 TRIM69Q86WT6 500 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 TSTD1Q8NFU3 115 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 ZNF514Q96K75 400 aaPredicted RBP29.93■■■□□ 2.38
CCM2-219ENST00000544363 CYP4F12Q9HCS2 524 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 NCKIPSDQ9NZQ3 722 aa29.93■■■□□ 2.38
CCM2-219ENST00000544363 RAD51BO15315 384 aa29.92■■■□□ 2.38
CCM2-219ENST00000544363 BOP1Q14137 746 aaKnown RBP29.92■■■□□ 2.38
CCM2-219ENST00000544363 ASZ1Q8WWH4 475 aa29.92■■■□□ 2.38
CCM2-219ENST00000544363 PHF21BQ96EK2 531 aa29.92■■■□□ 2.38
CCM2-219ENST00000544363 WDR26Q9H7D7 661 aa29.92■■■□□ 2.38
CCM2-219ENST00000544363 SUPT3HB4E1H0 165 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 NUAK1O60285 661 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 LILRB5O75023 590 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 SUPT3HO75486 399 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 LYPLA1O75608 230 aaPredicted RBP29.91■■■□□ 2.38
CCM2-219ENST00000544363 ZNF8P17098 575 aaPredicted RBP29.91■■■□□ 2.38
CCM2-219ENST00000544363 OVGP1Q12889 678 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 TMEM31Q5JXX7 168 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 SPATA21Q7Z572 469 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 GPSM1Q86YR5 675 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 SEC16BQ96JE7 1060 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 LGR4Q9BXB1 951 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 GPR34Q9UPC5 381 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 TMEM98Q9Y2Y6 226 aa29.91■■■□□ 2.38
CCM2-219ENST00000544363 GPC4O75487 556 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 TGDSO95455 350 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 ARRB2P32121 409 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 SF3A3Q12874 501 aaKnown RBP eCLIP29.9■■■□□ 2.38
CCM2-219ENST00000544363 CRLF3Q8IUI8 442 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 TRAPPC5Q8IUR0 188 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 TMEM237Q96Q45 408 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 HHIPQ96QV1 700 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 FAM126AQ9BYI3 521 aaPredicted RBP29.9■■■□□ 2.38
CCM2-219ENST00000544363 DRC3Q9H069 523 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 TMCO1Q9UM00 188 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 CDYLQ9Y232 598 aa29.9■■■□□ 2.38
CCM2-219ENST00000544363 SLC31A1O15431 190 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 MPC1LP0DKB6 136 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 IMPDH1P20839 514 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 IGFALSP35858 605 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 SBSNQ6UWP8 590 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 PTGR2Q8N8N7 351 aaPredicted RBP29.89■■■□□ 2.38
CCM2-219ENST00000544363 MOCOSQ96EN8 888 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 SORT1Q99523 831 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 PHPT1Q9NRX4 125 aaPredicted RBP29.89■■■□□ 2.38
CCM2-219ENST00000544363 OR1A2Q9Y585 309 aa29.89■■■□□ 2.38
CCM2-219ENST00000544363 TMEM202A6NGA9 273 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 STK25O00506 426 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 KLK8O60259 260 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 NPHS1O60500 1241 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 SEMA4FO95754 770 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 TROVE2P10155 538 aaKnown RBP eCLIP29.89■■■□□ 2.37
CCM2-219ENST00000544363 GFAPP14136 432 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 RCN2Q14257 317 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 ATG14Q6ZNE5 492 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 VRK3Q8IV63 474 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 CCNYL1Q8N7R7 359 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 PPP4R1Q8TF05 950 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 CLDN23Q96B33 292 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 L3HYPDHQ96EM0 354 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 LINC00615Q96LM1 132 aaPredicted RBP29.89■■■□□ 2.37
CCM2-219ENST00000544363 ACSS2Q9NR19 701 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 MUTYHQ9UIF7 546 aa29.89■■■□□ 2.37
CCM2-219ENST00000544363 SLCO2B1O94956 709 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 GSTM1P09488 218 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 HK3P52790 923 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 GSTM4Q03013 218 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 TGFBIQ15582 683 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 PFKFB4Q16877 469 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 CFAP157Q5JU67 520 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 DOK6Q6PKX4 331 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 NEK10Q6ZWH5 1172 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 FRA10AC1Q70Z53 315 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 RAB44Q7Z6P3 723 aaPredicted RBP29.88■■■□□ 2.37
CCM2-219ENST00000544363 ZNF547Q8IVP9 402 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 CACNA2D3Q8IZS8 1091 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 FBXO39Q8N4B4 442 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 PJA1Q8NG27 643 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 TRIM55Q9BYV6 548 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 CHRDQ9H2X0 955 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 FZD3Q9NPG1 666 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 ADAMTS6Q9UKP5 1117 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 CYP8B1Q9UNU6 501 aa29.88■■■□□ 2.37
CCM2-219ENST00000544363 CHUKO15111 745 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 HSPA4LO95757 839 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 SERPINB5P36952 375 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 PPP1R3AQ16821 1122 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 ZNF658BQ4V348 819 aaPredicted RBP29.87■■■□□ 2.37
CCM2-219ENST00000544363 SYTL3Q4VX76 610 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 CCDC197Q8NCU1 140 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 DENND6BQ8NEG7 585 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 TMEM159Q96B96 161 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 THOC1Q96FV9 657 aaKnown RBP29.87■■■□□ 2.37
CCM2-219ENST00000544363 CNDP1Q96KN2 507 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 NPHS2Q9NP85 383 aa29.87■■■□□ 2.37
CCM2-219ENST00000544363 NUDT4Q9NZJ9 180 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms