RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ARNTP27540 789 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 MAPK9P45984 424 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 ID4P47928 161 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 CD151P48509 253 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 CLCNKAP51800 687 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 PMS2P54278 862 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 SLC12A2P55011 1212 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 MAZP56270 477 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 GSTM4Q03013 218 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 HSPA14Q0VDF9 509 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 DNAJC3Q13217 504 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TYSND1Q2T9J0 566 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TTLL9Q3SXZ7 439 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 C14orf28Q4W4Y0 310 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TEDDM1Q5T9Z0 273 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 STEAP4Q687X5 459 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 UGT3A1Q6NUS8 523 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TRMT10BQ6PF06 316 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 CNSTQ6PJW8 725 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 NAPRTQ6XQN6 538 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 KIAA0408Q6ZU52 694 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 OTOAQ7RTW8 1153 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 EFL1Q7Z2Z2 1120 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 KANSL1Q7Z3B3 1105 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 STRA8Q7Z7C7 330 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 SLC9B2Q86UD5 537 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 NRROSQ86YC3 692 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 SLC35F3Q8IY50 421 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 GSPT2Q8IYD1 628 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 KRT222Q8N1A0 295 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 PPM1NQ8N819 430 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 GPATCH11Q8N954 259 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 AVL9Q8NBF6 648 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 KYQ8NBH2 561 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 C2CD4AQ8NCU7 369 aaPredicted RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 OR6C4Q8NGE1 309 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 UHMK1Q8TAS1 419 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 IFI44Q8TCB0 444 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 FBF1Q8TES7 1133 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 LPGAT1Q92604 370 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TMEM159Q96B96 161 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 FAM136AQ96C01 138 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 AHCYL2Q96HN2 611 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 ELMO2Q96JJ3 720 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 C12orf66Q96MD2 445 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 WWP1Q9H0M0 922 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 CDC42EP4Q9H3Q1 356 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 COG4Q9H9E3 785 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 IMP3Q9NV31 184 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 NINJ2Q9NZG7 142 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TBC1D29Q9UFV1 150 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 TSR3Q9UJK0 312 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 ACSL5Q9ULC5 683 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 PADI4Q9UM07 663 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 APOBEC2Q9Y235 224 aaKnown RBP6.2□□□□□ -1.42
LTBR-212ENST00000543542 COMMD10Q9Y6G5 202 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 IKBKGQ9Y6K9 419 aa6.2□□□□□ -1.42
LTBR-212ENST00000543542 ZFHX2Q9C0A1 2572 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 A0A087WUV0 522 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 KIR2DS5A0A0G2JLQ3 304 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 A0A0G2JNG1 304 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 SPAARA0A1B0GVQ0 90 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 TCRBV9S1A1TA0A576 114 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 PABPN1LA6NDY0 278 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 OR52A4PA6NMU1 304 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 BHMG1C9JSJ3 638 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 POC1B-GALNT4F8VUJ3 575 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 KIR2DS3K7RE56 304 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 NIPSNAP2O75323 286 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 RFPL3O75679 317 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 KCNK5O95279 499 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 S1PR4O95977 384 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 AHSGP02765 367 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CKMT1AP12532 417 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CEACAM1P13688 526 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CSRP1P21291 193 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 RPS3P23396 243 aaKnown RBP eCLIP6.19□□□□□ -1.42
LTBR-212ENST00000543542 ALDH4A1P30038 563 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 ABCG1P45844 678 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 PREPP48147 710 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 LEPRP48357 1165 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 GPX6P59796 221 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 SIM1P81133 766 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 PLOD1Q02809 727 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 HHEXQ03014 270 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 DMPKQ09013 629 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 PDAP1Q13442 181 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 FRG1Q14331 258 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 PUM1Q14671 1186 aaKnown RBP eCLIP6.19□□□□□ -1.42
LTBR-212ENST00000543542 KIR2DS5Q14953 304 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 PLCL1Q15111 1095 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 ERCC6LQ2NKX8 1250 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 PROX2Q3B8N5 592 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 KBTBD12Q3ZCT8 623 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 ZNF789Q5FWF6 425 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CTSL3PQ5NE16 218 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 METRNLQ641Q3 311 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 FAM45BPQ6NSW5 357 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 GUSBP11Q6P575 273 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 TTC23LQ6PF05 361 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms