RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PAPD4Q6PIY7 484 aaKnown RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 CACNA2D4Q7Z3S7 1137 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ZDHHC23Q8IYP9 409 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC25A41Q8N5S1 370 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 LRRC57Q8N9N7 239 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 SCCPDHQ8NBX0 429 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 UXS1Q8NBZ7 420 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ZBTB44Q8NCP5 570 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 LENG9Q96B70 501 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 CLMNQ96JQ2 1002 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 BBC3Q96PG8 261 aaPredicted RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 SMC6Q96SB8 1091 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 RUFY1Q96T51 708 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 TMEM79Q9BSE2 394 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 MAGIXQ9H6Y5 334 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF703Q9H7S9 590 aaPredicted RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 HINT3Q9NQE9 182 aaKnown RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 MCM9Q9NXL9 1143 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 CYP39A1Q9NYL5 469 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 NINJ2Q9NZG7 142 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 DBNLQ9UJU6 430 aaKnown RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ING1Q9UK53 422 aaPredicted RBP3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 STX8Q9UNK0 236 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 NFE2L3Q9Y4A8 694 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 STON1Q9Y6Q2 735 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 AP1M2Q9Y6Q5 423 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 SHPRHQ149N8 1683 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 MAST3O60307 1309 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ACEP12821 1306 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF541Q9H0D2 1346 aa3.89□□□□□ -1.79
SFSWAP-211ENST00000542813 SMG6Q86US8 1419 aaKnown RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 KIAA1107Q9UPP5 1409 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ARHGAP23Q9P227 1491 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 C5orf52A6NGY3 159 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 FOXO6A8MYZ6 492 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 NPIPB8E9PQR5 432 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 POC1B-GALNT4F8VUJ3 575 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 HSPB6O14558 160 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 AKAP3O75969 853 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 MOCS3O95396 460 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 TOP3BO95985 862 aaKnown RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 CBSLP0DN79 551 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 CYP2A6P11509 494 aaPredicted RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 GNAZP19086 355 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 CYP11B2P19099 503 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 MYF6P23409 242 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 AZGP1P25311 298 aaKnown RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 NMBRP28336 390 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 HOXA11P31270 313 aaPredicted RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 DCTDP32321 178 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 CTNNB1P35222 781 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 CBSP35520 551 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 TGFB2P61812 414 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 HNRNPKP61978 463 aaKnown RBP eCLIP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 FOXE3Q13461 319 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 FHL2Q14192 279 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 LPIN1Q14693 890 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ENTPD8Q5MY95 495 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 TMEM182Q6ZP80 229 aaPredicted RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 RHOUQ7L0Q8 258 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 TLK2Q86UE8 772 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ANKRD13BQ86YJ7 626 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 C1orf210Q8IVY1 113 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 FAM219AQ8IW50 185 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 SFTPA2Q8IWL1 248 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ADGRF4Q8IZF3 695 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 LCORLQ8N3X6 602 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 MRPL43Q8N983 215 aaKnown RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF540Q8NDQ6 660 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 OR1J2Q8NGS2 313 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 IL17DQ8TAD2 202 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 WDR20Q8TBZ3 569 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 HM13Q8TCT9 377 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 PROKR1Q8TCW9 393 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 HEXDCQ8WVB3 486 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC13A3Q8WWT9 602 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 PRCCQ92733 491 aaPredicted RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ST6GALNAC6Q969X2 333 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 BICD1Q96G01 975 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 OLFM1Q99784 485 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 HSD3B7Q9H2F3 369 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 MOV10Q9HCE1 1003 aaKnown RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 MKKSQ9NPJ1 570 aaPredicted RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 CYSLTR2Q9NS75 346 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ACSS1Q9NUB1 689 aaPredicted RBP3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 TAS2R3Q9NYW6 316 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 STK39Q9UEW8 545 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 POLLQ9UGP5 575 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 FBXW2Q9UKT8 454 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 RABL2BQ9UNT1 228 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 SLIT1O75093 1534 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 ZBED9Q6R2W3 1325 aa3.88□□□□□ -1.79
SFSWAP-211ENST00000542813 BLMP54132 1417 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ERVK-7P63135 1459 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 EIF4E1BA6NMX2 242 aaKnown RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 M0QZ24 198 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RNF8O76064 485 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 KCNK5O95279 499 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CLDN7O95471 211 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ALPPP05187 535 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms