RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PSD3Q9NYI0 1048 aa9.56□□□□□ -0.88
CHFR-220ENST00000541817 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.56□□□□□ -0.88
CHFR-220ENST00000541817 UBA2Q9UBT2 640 aaPredicted RBP9.56□□□□□ -0.88
CHFR-220ENST00000541817 INTUQ9ULD6 942 aa9.56□□□□□ -0.88
CHFR-220ENST00000541817 CNTN6Q9UQ52 1028 aa9.56□□□□□ -0.88
CHFR-220ENST00000541817 SPTBP11277 2137 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 A0A087X0T9 212 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 FAM221AA4D161 298 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 GOLGA8SH3BPF8 625 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 MEN1O00255 615 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 CES2O00748 559 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 TOX3O15405 576 aaPredicted RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 CREB3O43889 395 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 HEXIM1O94992 359 aaKnown RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 KLK3P07288 261 aaPredicted RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 RAB40ALP0C0E4 278 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 H2AFZP0C0S5 128 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 FAM228BP0C875 321 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 LHCGRP22888 699 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 VIPR1P32241 457 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 TSFMP43897 325 aaKnown RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 BCL2L1Q07817 233 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 CETN1Q12798 172 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 GRM3Q14832 879 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 RPS6KA1Q15418 735 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 SEPT7Q16181 437 aaKnown RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 C15orf59Q2T9L4 293 aaPredicted RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 PTCHD3Q3KNS1 767 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 FAM102AQ5T9C2 384 aaPredicted RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 MEI1Q5TIA1 1274 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 C8orf74Q6P047 294 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 FAM198BQ6UWH4 519 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 H2AFVQ71UI9 128 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 IRF2BP2Q7Z5L9 587 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 MRGPREQ86SM8 312 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 RAB43Q86YS6 212 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 TRIM48Q8IWZ4 208 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 IFT20Q8IY31 132 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 SYCE1Q8N0S2 351 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 PYROXD2Q8N2H3 581 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 COG1Q8WTW3 980 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 CASKIN2Q8WXE0 1202 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 TM9SF4Q92544 642 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 TBC1D31Q96DN5 1066 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 TUBGCP5Q96RT8 1024 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 TLR10Q9BXR5 811 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 NLNQ9BYT8 704 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 ABCG8Q9H221 673 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 OSGEPL1Q9H4B0 414 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 DLL4Q9NR61 685 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 VPS18Q9P253 973 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 ZNF624Q9P2J8 865 aaPredicted RBP9.55□□□□□ -0.88
CHFR-220ENST00000541817 BTRCQ9Y297 605 aa9.55□□□□□ -0.88
CHFR-220ENST00000541817 A0A0A6YYK5 440 aaPredicted RBP9.54□□□□□ -0.88
CHFR-220ENST00000541817 KIR2DS5A0A0G2JLQ3 304 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 A0A0G2JNG1 304 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 H3BQF6 201 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 KIR2DS3K7RE56 304 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 DNAJC6O75061 913 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 WISP2O76076 250 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 IPO13O94829 963 aaKnown RBP9.54□□□□□ -0.88
CHFR-220ENST00000541817 VIPP01282 170 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 CTPS1P17812 591 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 ADRA1BP35368 520 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 SOX5P35711 763 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 TDGF1P3P51864 188 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 APBA1Q02410 837 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 GCNT1Q02742 428 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 ZNF169Q14929 603 aaPredicted RBP9.54□□□□□ -0.88
CHFR-220ENST00000541817 KIR2DS5Q14953 304 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 ZNF648Q5T619 568 aaPredicted RBP9.54□□□□□ -0.88
CHFR-220ENST00000541817 FAAH2Q6GMR7 532 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 DPY19L2P1Q6NXN4 242 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 ALKBH5Q6P6C2 394 aaKnown RBP9.54□□□□□ -0.88
CHFR-220ENST00000541817 XKRXQ6PP77 449 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 TMEM207Q6UWW9 146 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 ZNF571Q7Z3V5 609 aaPredicted RBP9.54□□□□□ -0.88
CHFR-220ENST00000541817 DSELQ8IZU8 1212 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 EMC1Q8N766 993 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 CLEC1AQ8NC01 280 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 CLIP3Q96DZ5 547 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 SLC41A2Q96JW4 573 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 FCRL4Q96PJ5 515 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 GBP5Q96PP8 586 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 MAP3K3Q99759 626 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 HERPUD2Q9BSE4 406 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 LRRC1Q9BTT6 524 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 STK33Q9BYT3 514 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 SIX2Q9NPC8 291 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 DNAJC12Q9UKB3 198 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 PCDHGC4Q9Y5F7 938 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
CHFR-220ENST00000541817 DOCK10Q96BY6 2186 aa9.53□□□□□ -0.88
CHFR-220ENST00000541817 NCOA6Q14686 2063 aaPredicted RBP9.53□□□□□ -0.88
CHFR-220ENST00000541817 NPIPB15A6NHN6 443 aaPredicted RBP9.53□□□□□ -0.88
CHFR-220ENST00000541817 TRAFD1O14545 582 aaPredicted RBP9.53□□□□□ -0.88
CHFR-220ENST00000541817 PCDH17O14917 1159 aa9.53□□□□□ -0.88
CHFR-220ENST00000541817 P4HA2O15460 535 aa9.53□□□□□ -0.88
CHFR-220ENST00000541817 UNC5CO95185 931 aa9.53□□□□□ -0.88
CHFR-220ENST00000541817 FTCDO95954 541 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms