RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 LYSMD4Q5XG99 296 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 OTOAQ7RTW8 1153 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 PIGWQ7Z7B1 504 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 PPP1R14CQ8TAE6 165 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 TSSK1BQ9BXA7 367 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 C1QTNF7Q9BXJ2 289 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 SARS2Q9NP81 518 aaKnown RBP27.38■■□□□ 1.97
CCM2-218ENST00000541586 CEP192Q8TEP8 1941 aa27.38■■□□□ 1.97
CCM2-218ENST00000541586 RBP1P09455 135 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 TFEBP19484 476 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 CREB5Q02930 508 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 SF3A3Q12874 501 aaKnown RBP eCLIP27.37■■□□□ 1.97
CCM2-218ENST00000541586 GKAP1Q5VSY0 366 aaPredicted RBP27.37■■□□□ 1.97
CCM2-218ENST00000541586 UGT3A1Q6NUS8 523 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 ISCA2Q86U28 154 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 MBNL1Q9NR56 388 aaKnown RBP27.37■■□□□ 1.97
CCM2-218ENST00000541586 RAB23Q9ULC3 237 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 SLCO1B1Q9Y6L6 691 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 LRRK1Q38SD2 2015 aa27.37■■□□□ 1.97
CCM2-218ENST00000541586 ATXN2Q99700 1313 aaKnown RBP27.37■■□□□ 1.97
CCM2-218ENST00000541586 ZBTB14O43829 449 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 PCCBP05166 539 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 RALBP11234 206 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 HNRNPA2B1P22626 353 aaKnown RBP27.36■■□□□ 1.97
CCM2-218ENST00000541586 CD27P26842 260 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 AKT2P31751 481 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 CLDN2P57739 230 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 WSCD2Q2TBF2 565 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 LKAAEAR1Q8TD35 194 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 DERL2Q9GZP9 239 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 ALG9Q9H6U8 611 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 OXSMQ9NWU1 459 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 DHRS7Q9Y394 339 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 CACNA1HO95180 2353 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 C10orf142B7Z368 130 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 STX3Q13277 289 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 ZNF765Q7L2R6 523 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 NKAPQ8N5F7 415 aaKnown RBP27.36■■□□□ 1.97
CCM2-218ENST00000541586 PTERQ96BW5 349 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 SGF29Q96ES7 293 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 VPS35Q96QK1 796 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 IRF2BPLQ9H1B7 796 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 AASDHPPTQ9NRN7 309 aa27.36■■□□□ 1.97
CCM2-218ENST00000541586 PRAMEF26H0Y7S4 382 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 DLX3O60479 287 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 SNX3O60493 162 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 SNNO75324 88 aaPredicted RBP27.35■■□□□ 1.97
CCM2-218ENST00000541586 SERPINE1P05121 402 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 ITGB6P18564 788 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 AKT1P31749 480 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 DDHD1Q8NEL9 900 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 OR6Y1Q8NGX8 325 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 BTN2A2Q8WVV5 523 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 PIGKQ92643 395 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 GRAMD1AQ96CP6 724 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 SEC16BQ96JE7 1060 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 ORAI3Q9BRQ5 295 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 HCN4Q9Y3Q4 1203 aa27.35■■□□□ 1.97
CCM2-218ENST00000541586 H0Y8X5 98 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 TRIM13O60858 407 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 MTX2O75431 263 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 SLC25A14O95258 325 aaPredicted RBP27.34■■□□□ 1.97
CCM2-218ENST00000541586 TRIM16O95361 564 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 TSPAN12O95859 305 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 IRF4Q15306 451 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 CPNE9Q8IYJ1 553 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 PELI3Q8N2H9 469 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 TP53I13Q8NBR0 393 aaPredicted RBP27.34■■□□□ 1.97
CCM2-218ENST00000541586 PLA2G15Q8NCC3 412 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 EEF1AKMT1Q8WVE0 214 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 SREK1Q8WXA9 508 aaKnown RBP27.34■■□□□ 1.97
CCM2-218ENST00000541586 ASB12Q8WXK4 309 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 DNASE2BQ8WZ79 361 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 SLC6A18Q96N87 628 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 LENG8Q96PV6 779 aaPredicted RBP27.34■■□□□ 1.97
CCM2-218ENST00000541586 ZNF395Q9H8N7 513 aaPredicted RBP27.34■■□□□ 1.97
CCM2-218ENST00000541586 TMEM74BQ9NUR3 256 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 DMTF1Q9Y222 760 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 SPAG17Q6Q759 2223 aa27.34■■□□□ 1.97
CCM2-218ENST00000541586 GRK2P25098 689 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 KCNC1P48547 511 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 IL2P60568 153 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 OCRLQ01968 901 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 INPP5AQ14642 412 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 RAET1GQ6H3X3 334 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 ZNF771Q7L3S4 317 aaPredicted RBP27.33■■□□□ 1.97
CCM2-218ENST00000541586 INPP5DQ92835 1189 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 GLYATL1Q969I3 302 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 DCUN1D1Q96GG9 259 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 C20orf27Q9GZN8 174 aa27.33■■□□□ 1.97
CCM2-218ENST00000541586 K7ESM1 405 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 FPGTO14772 594 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 SOD1P00441 154 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 ATP1B2P14415 290 aaPredicted RBP27.33■■□□□ 1.96
CCM2-218ENST00000541586 NUDT1P36639 197 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 ATP6V0D1P61421 351 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 AGERQ15109 404 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 KHDC1Q4VXA5 237 aaKnown RBP27.33■■□□□ 1.96
CCM2-218ENST00000541586 LIPMQ5VYY2 423 aa27.33■■□□□ 1.96
CCM2-218ENST00000541586 FOXR1Q6PIV2 292 aa27.33■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms