RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 LGI2Q8N0V4 545 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 NKAPQ8N5F7 415 aaKnown RBP9.41□□□□□ -0.9
CNOT4-212ENST00000541284 CDYL2Q8N8U2 506 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 FKBP10Q96AY3 582 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 LINGO1Q96FE5 620 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GPR62Q9BZJ7 368 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 AMBRA1Q9C0C7 1298 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 PIF1Q9H611 641 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 RHBDL2Q9NX52 303 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 SMPD4Q9NXE4 827 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 PLXNA2O75051 1894 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 TRBV5-3A0A0A0MS03 114 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 SYCE1LA8MT33 242 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 AREL1O15033 823 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 INSIG1O15503 277 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 TAPBPO15533 448 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 KDELR3O43731 214 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 SNX2O60749 519 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 ATF6P18850 670 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 DGKQP52824 942 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 KCNC4Q03721 635 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 PCBP2Q15366 365 aaKnown RBP eCLIP9.4□□□□□ -0.95e-7■■■■□ 24.8
CNOT4-212ENST00000541284 DPY19L1Q2PZI1 675 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 RFTN2Q52LD8 501 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 ZNF773Q6PK81 442 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 PROSER1Q86XN7 944 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 REM2Q8IYK8 340 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 C10orf111Q8N326 155 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 PJA1Q8NG27 643 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 SPATA17Q96L03 361 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 SEPHS2Q99611 448 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 MAGEH1Q9H213 219 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 OLA1Q9NTK5 396 aaKnown RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 MARCH5Q9NX47 278 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 SLC25A37Q9NYZ2 338 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 VAPAQ9P0L0 249 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 FBXO10Q9UK96 956 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 ZFP37Q9Y6Q3 630 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 V9GYQ6 96 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 TYW5A2RUC4 315 aaKnown RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 KLKB1P03952 638 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 ALDH3A2P51648 485 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 CLCN4P51793 760 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 RPS24P62847 133 aaKnown RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 TRAF2Q12933 501 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 ABRAXAS2Q15018 415 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 CTU2Q2VPK5 515 aaKnown RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 GLYATQ6IB77 296 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 GOLGA7Q7Z5G4 137 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 ZNF548Q8NEK5 533 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-212ENST00000541284 OR56A4Q8NGH8 313 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 SNX19Q92543 992 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 KCNJ9Q92806 393 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 WBP2Q969T9 261 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 TMBIM1Q969X1 311 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 RHBDF1Q96CC6 855 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 PPM1MQ96MI6 270 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 HBEGFQ99075 208 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 CGREF1Q99674 301 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 TUBA1CQ9BQE3 449 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 IRAK4Q9NWZ3 460 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 HCSTQ9UBK5 93 aa9.4□□□□□ -0.9
CNOT4-212ENST00000541284 STAMBPO95630 424 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 TFPTP0C1Z6 253 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 JAK1P23458 1154 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 MC4RP32245 332 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 PIGAP37287 484 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 GZMMP51124 257 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 NAA20P61599 178 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 RPS6KA2Q15349 733 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 KCNA10Q16322 511 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 CYP20A1Q6UW02 462 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 ENPP6Q6UWR7 440 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 RBM23Q86U06 439 aaKnown RBP9.4□□□□□ -0.91
CNOT4-212ENST00000541284 SMYD1Q8NB12 490 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 LKAAEAR1Q8TD35 194 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 OSCP1Q8WVF1 389 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 VOPP1Q96AW1 172 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 PDLIM5Q96HC4 596 aaKnown RBP9.4□□□□□ -0.91
CNOT4-212ENST00000541284 TNKS2Q9H2K2 1166 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 TLR8Q9NR97 1041 aaKnown RBP9.4□□□□□ -0.91
CNOT4-212ENST00000541284 SLC6A13Q9NSD5 602 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 PRG3Q9Y2Y8 225 aaPredicted RBP9.4□□□□□ -0.91
CNOT4-212ENST00000541284 CORINQ9Y5Q5 1042 aa9.4□□□□□ -0.91
CNOT4-212ENST00000541284 FZD6O60353 706 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 DFNA5O60443 496 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 SYNCRIPO60506 623 aaKnown RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 CAPN1P07384 714 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 MBL2P11226 248 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 CRHBPP24387 322 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 IST1P53990 364 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 ARF5P84085 180 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 PPP2R2BQ00005 443 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 NFATC3Q12968 1075 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 DAG1Q14118 895 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 CXorf57Q6NSI4 855 aaKnown RBP9.39□□□□□ -0.91
CNOT4-212ENST00000541284 XKR5Q6UX68 686 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 TMEM179BQ7Z7N9 219 aa9.39□□□□□ -0.91
CNOT4-212ENST00000541284 GPSM1Q86YR5 675 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms