RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OR7D4Q8NG98 312 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 OR6P1Q8NGX9 317 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 HCAR2Q8TDS4 363 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 MFSD3Q96ES6 412 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 SERAC1Q96JX3 654 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 ZNF641Q96N77 438 aaPredicted RBP8.29□□□□□ -1.08
CHD4-208ENST00000540960 FAM111AQ96PZ2 611 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 APOL2Q9BQE5 337 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 TSSK1BQ9BXA7 367 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 SLC13A1Q9BZW2 595 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 CAAP1Q9H8G2 361 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 PLAC1Q9HBJ0 212 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 SYTL2Q9HCH5 934 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 MAGEE1Q9HCI5 957 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 SMYD2Q9NRG4 433 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 SNX15Q9NRS6 342 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 PCMTD2Q9NV79 361 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 NLE1Q9NVX2 485 aaPredicted RBP8.29□□□□□ -1.08
CHD4-208ENST00000540960 MARK1Q9P0L2 795 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 SIRPGQ9P1W8 387 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 DEC1Q9P2X7 70 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 APPL1Q9UKG1 709 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 PHTF1Q9UMS5 762 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 PCDHGA4Q9Y5G9 962 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 AKAP9Q99996 3911 aa8.29□□□□□ -1.08
CHD4-208ENST00000540960 TDRD6O60522 2096 aaKnown RBP8.29□□□□□ -1.08
CHD4-208ENST00000540960 A0A0D9SEW6 157 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 GOLGA8QA0A0J9YX86 632 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 GOLGA8OA6NCC3 632 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 TMEM114B3SHH9 223 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 ANKRD66B4E2M5 251 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 GOLGA8NF8WBI6 632 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 H3BMM5 538 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 GOLGA8RI6L899 631 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 TRAFD1O14545 582 aaPredicted RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 VILLO15195 856 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CASC3O15234 703 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 STX7O15400 261 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CCDC22O60826 627 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 ZMPSTE24O75844 475 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 FSBPO95073 299 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 POP4O95707 220 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 PENKP01210 267 aaPredicted RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 SERPINE1P05121 402 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 PYGLP06737 847 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 MMP2P08253 660 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CPA3P15088 417 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CREB1P16220 341 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CD9P21926 228 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CD27P26842 260 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 OXTRP30559 389 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 ETV4P43268 484 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 ARCN1P48444 511 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 C21orf59P57076 290 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 MAXP61244 160 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 TMPRSS15P98073 1019 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 IFT88Q13099 833 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 KCNAB2Q13303 367 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CYTH1Q15438 398 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 TBCCQ15814 346 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 ISXQ2M1V0 245 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 LACTB2Q53H82 288 aaPredicted RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 FASTKD1Q53R41 847 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 ZNF470Q6ECI4 717 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 FAM45BPQ6NSW5 357 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 NCEH1Q6PIU2 408 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 TRPM8Q7Z2W7 1104 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CLEC14AQ86T13 490 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 VASH2Q86V25 355 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CIR1Q86X95 450 aaPredicted RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 TMEM25Q86YD3 366 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 RAVER1Q8IY67 606 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 AHI1Q8N157 1196 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 KDM1BQ8NB78 822 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 NETO2Q8NC67 525 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 FAM45AQ8TCE6 357 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 SIPA1Q96FS4 1042 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 SLC6A18Q96N87 628 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 TRIB3Q96RU7 358 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 TDRD1Q9BXT4 1180 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 CPEB1Q9BZB8 566 aaKnown RBP8.28□□□□□ -1.08
CHD4-208ENST00000540960 WWP1Q9H0M0 922 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 CDH19Q9H159 772 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 EBF2Q9HAK2 575 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 NMRAL1Q9HBL8 299 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 NOD2Q9HC29 1040 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 PFDN4Q9NQP4 134 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 FGFR1OP2Q9NVK5 253 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 VPS51Q9UID3 782 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 ITGB1BP2Q9UKP3 347 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 SLC39A10Q9ULF5 831 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 HS3ST2Q9Y278 367 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 OR51B4Q9Y5P0 310 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 STON1Q9Y6Q2 735 aa8.28□□□□□ -1.08
CHD4-208ENST00000540960 FAM95CA0A1B0GW59 222 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 H7C0S8 307 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 CD3EAPO15446 510 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 LDB2O43679 373 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 GREM1O60565 184 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms