RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 HSD17B1P14061 328 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 RPL17P18621 184 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 PTPN3P26045 913 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ELK4P28324 431 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 NMBRP28336 390 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 OXTRP30559 389 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 RFC2P35250 354 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SMAD3P84022 425 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 TRIM32Q13049 653 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CYP51A1Q16850 503 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 FAM110CQ1W6H9 321 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 FNDC3BQ53EP0 1204 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 NOMO2Q5JPE7 1267 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ATAD3BQ5T9A4 648 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 MARC1Q5VT66 337 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 USP51Q70EK9 711 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CYP2U1Q7Z449 544 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ANKRD13BQ86YJ7 626 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 GATAD2AQ86YP4 633 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SPATA6LQ8N4H0 392 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 LEMD2Q8NC56 503 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 OR6K2Q8NGY2 324 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ZFP90Q8TF47 636 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CLEC4CQ8WTT0 213 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 S100ZQ8WXG8 99 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 COQ7Q99807 217 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 C11orf84Q9BUA3 381 aaPredicted RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 LHPPQ9H008 270 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 INTS10Q9NVR2 710 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 ABCD2Q9UBJ2 740 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 NDUFAF1Q9Y375 327 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 PATJQ8NI35 1801 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 NEMP2A6NFY4 417 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 C16orf96A6NNT2 1141 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 H0YAE9 185 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ANGPT2O15123 496 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SCAMP1O15126 338 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 INPP4BO15327 924 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 LDLRP01130 860 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 MMP3P08254 477 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 HNRNPFP52597 415 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 YBX1P67809 324 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 PHC1P78364 1004 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ADARB1P78563 741 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 ZBTB6Q15916 424 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SOWAHAQ2M3V2 549 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SLC10A6Q3KNW5 377 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 PKDCCQ504Y2 493 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.17□□□□□ -1.58
PROM1-220ENST00000540805 NAPEPLDQ6IQ20 393 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 STRADAQ7RTN6 431 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 OTOP3Q7RTS5 596 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 GLRX5Q86SX6 157 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ITIH5Q86UX2 942 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 RETREG3Q86VR2 466 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 NT5DC4Q86YG4 428 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CADM2Q8N3J6 435 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CCDC126Q96EE4 140 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ADNPQ9H2P0 1102 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 MAGEE1Q9HCI5 957 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 TRMT13Q9NUP7 481 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 THG1LQ9NWX6 298 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 GMIPQ9P107 970 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ANAPC2Q9UJX6 822 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 TNFSF13BQ9Y275 285 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 NLRC5Q86WI3 1866 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 A0A087X1B8 175 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 A0A0J9YYE9 177 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 MBLAC1A4D2B0 266 aaPredicted RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 C2orf81A6NN90 581 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 HAS3O00219 553 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 AP3D1O14617 1153 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 TSPAN1O60635 241 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 DEAF1O75398 565 aaPredicted RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 GUCA1CO95843 209 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ARF4P18085 180 aaPredicted RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 CES1P23141 567 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 GSTM2P28161 218 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SOAT1P35610 550 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 GJA9P57773 515 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 MRPS6P82932 125 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 BST2Q10589 180 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 SPCS2Q15005 226 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 RBM48Q5RL73 367 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 PRPF38BQ5VTL8 546 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 CRTC3Q6UUV7 619 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 LIMS2Q7Z4I7 341 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SLC22A16Q86VW1 577 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 TBC1D21Q8IYX1 336 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 SLC35F5Q8WV83 523 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ING5Q8WYH8 240 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 GPR78Q96P69 363 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 CDK5RAP1Q96SZ6 601 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 MRPL9Q9BYD2 267 aaKnown RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 MUC13Q9H3R2 512 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 FAM124BQ9H5Z6 455 aaPredicted RBP5.17□□□□□ -1.58
PROM1-220ENST00000540805 ASB7Q9H672 318 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 ADPRHL2Q9NX46 363 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 TMEM161AQ9NX61 479 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 WWOXQ9NZC7 414 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms