RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FZD10	Q9ULW2	581 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	COMMD10	Q9Y6G5	202 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PIAS3	Q9Y6X2	628 aa		5.61	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	YJEFN3	A6XGL0	299 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HACD1	B0YJ81	288 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CBX4	O00257	560 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC22A2	O15244	555 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KDM1A	O60341	852 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	E2F6	O75461	281 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SULT1C4	O75897	302 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MT-CYB	P00156	380 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SRF	P11831	508 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PCNA	P12004	261 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DCK	P27707	260 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ALDH4A1	P30038	563 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ADSL	P30566	484 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IDUA	P35475	653 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OPRL1	P41146	370 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NTHL1	P78549	312 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAPK11	Q15759	364 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZNF789	Q5FWF6	425 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RABL3	Q5HYI8	236 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RBM20	Q5T481	1227 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KIAA1324	Q6UXG2	1013 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TPRG1	Q6ZUI0	275 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LDB1	Q86U70	411 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NPAS3	Q8IXF0	933 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NPW	Q8N729	165 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TNIP2	Q8NFZ5	429 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TRPC4AP	Q8TEL6	797 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CHPT1	Q8WUD6	406 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OSCP1	Q8WVF1	389 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SNX19	Q92543	992 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MUS81	Q96NY9	551 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	VAT1	Q99536	393 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FSD1L	Q9BXM9	530 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	KLHL25	Q9H0H3	589 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RHOJ	Q9H4E5	214 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAP10	Q9P2G4	905 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CCL22	O00626	93 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	COCH	O43405	550 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PAGE1	O75459	146 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RSL1D1	O76021	490 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ANXA9	O76027	345 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SUPT7L	O94864	414 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PRNP	P04156	253 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	APOA4	P06727	396 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PABPC1	P11940	636 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EEF1D	P29692	281 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GPR15	P49685	360 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC12A2	P55011	1212 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RAB10	P61026	200 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PLIN5	Q00G26	463 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TRAP1	Q12931	704 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PPP1R8	Q12972	351 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SEPT6	Q14141	434 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SQLE	Q14534	574 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IMPG1	Q17R60	797 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TCTN1	Q2MV58	587 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PKDCC	Q504Y2	493 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PM20D1	Q6GTS8	502 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NIPAL1	Q6NVV3	410 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC2A7	Q6PXP3	512 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZNF783	Q6ZMS7	281 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PRR23B	Q6ZRT6	265 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HFE2	Q6ZVN8	426 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ADGRD2	Q7Z7M1	963 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IPMK	Q8NFU5	416 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FAM3C	Q92520	227 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAEL	Q96JY0	434 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC25A23	Q9BV35	468 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LHPP	Q9H008	270 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MRPL46	Q9H2W6	279 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EPS8L2	Q9H6S3	715 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NANOG	Q9H9S0	305 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CASS4	Q9NQ75	786 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SPHK2	Q9NRA0	654 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ERGIC3	Q9Y282	383 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FAM32A	Q9Y421	112 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TCAF1	Q9Y4C2	921 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TRIP11	Q15643	1979 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		A0A0J9YYE9	177 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LRRC14B	A6NHZ5	514 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		F8W810	466 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		H3BMM5	538 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	UBFD1	O14562	309 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LSM1	O15116	133 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	AXIN1	O15169	862 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ACOX3	O15254	700 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ALDOC	P09972	364 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CYP2A6	P11509	494 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IL7R	P16871	459 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PSMA4	P25789	261 aa	Known RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NKX2-5	P52952	324 aa	Predicted RBP	5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SPCS2	Q15005	226 aa		5.6	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SMAD2	Q15796	467 aa	Known RBP	5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms