RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TMEM220Q6QAJ8 160 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 CRTC3Q6UUV7 619 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 NRROSQ86YC3 692 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 PALM2Q8IXS6 379 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 EIF1ADQ8N9N8 165 aaKnown RBP16.44■□□□□ 0.22
UBC-208ENST00000540700 LPGAT1Q92604 370 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 PARD6BQ9BYG5 372 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 P2RY12Q9H244 342 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 FBXO6Q9NRD1 293 aaPredicted RBP16.44■□□□□ 0.22
UBC-208ENST00000540700 GULP1Q9UBP9 304 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 APOBEC3BQ9UH17 382 aaKnown RBP16.44■□□□□ 0.22
UBC-208ENST00000540700 PSAT1Q9Y617 370 aa16.44■□□□□ 0.22
UBC-208ENST00000540700 OR2AG2A6NM03 316 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 CYSRT1A8MQ03 144 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 PIAS2O75928 621 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 RASGRP1O95267 797 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 S1PR4O95977 384 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 TNFP01375 233 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 GIMD1P0DJR0 217 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 OGNP20774 298 aaKnown RBP16.43■□□□□ 0.22
UBC-208ENST00000540700 AK4P27144 223 aaPredicted RBP16.43■□□□□ 0.22
UBC-208ENST00000540700 EPHA8P29322 1005 aaPredicted RBP16.43■□□□□ 0.22
UBC-208ENST00000540700 TARDBPQ13148 414 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBC-208ENST00000540700 THOC5Q13769 683 aaKnown RBP16.43■□□□□ 0.22
UBC-208ENST00000540700 PLA2G4EQ3MJ16 856 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 ZNF658BQ4V348 819 aaPredicted RBP16.43■□□□□ 0.22
UBC-208ENST00000540700 CTSL3PQ5NE16 218 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 PACS1Q6VY07 963 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 C3orf62Q6ZUJ4 267 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 SLC25A45Q8N413 288 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 OTUD6BQ8N6M0 293 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 C2CD4AQ8NCU7 369 aaPredicted RBP16.43■□□□□ 0.22
UBC-208ENST00000540700 ZNF548Q8NEK5 533 aaPredicted RBP16.43■□□□□ 0.22
UBC-208ENST00000540700 FBXO5Q9UKT4 447 aa16.43■□□□□ 0.22
UBC-208ENST00000540700 PRR19A6NJB7 356 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 FAM159BA6NKW6 160 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 IQCF5A8MTL0 148 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 GRID2O43424 1007 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 ATP1B2P14415 290 aaPredicted RBP16.42■□□□□ 0.22
UBC-208ENST00000540700 TUBB4BP68371 445 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 MGAT5Q09328 741 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 BCL7AQ4VC05 210 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 PRRT3Q5FWE3 981 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 MRNIPQ6NTE8 343 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 ZNF549Q6P9A3 640 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 CNSTQ6PJW8 725 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 CERS6Q6ZMG9 384 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 GALNT13Q8IUC8 556 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 SFTPA2Q8IWL1 248 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 LILRA3Q8N6C8 439 aaPredicted RBP16.42■□□□□ 0.22
UBC-208ENST00000540700 SAP25Q8TEE9 199 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 FBF1Q8TES7 1133 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 CNDP2Q96KP4 475 aaKnown RBP16.42■□□□□ 0.22
UBC-208ENST00000540700 BIRC8Q96P09 236 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 OR2M4Q96R27 311 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 PPANQ9NQ55 473 aaKnown RBP16.42■□□□□ 0.22
UBC-208ENST00000540700 ZNHIT2Q9UHR6 403 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 RAB21Q9UL25 225 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 SPTA1P02549 2419 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 ATMQ13315 3056 aa16.42■□□□□ 0.22
UBC-208ENST00000540700 RFPL3O75679 317 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 HAUS5O94927 633 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 ACSL3O95573 720 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 LDOC1O95751 146 aaPredicted RBP16.41■□□□□ 0.22
UBC-208ENST00000540700 EML2O95834 649 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 ACP5P13686 325 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 DGKAP23743 735 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 NSG1P42857 185 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 TTPAP49638 278 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 PRLHRP49683 370 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 CTBSQ01459 385 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 AARS2Q5JTZ9 985 aaKnown RBP16.41■□□□□ 0.22
UBC-208ENST00000540700 HES3Q5TGS1 186 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 LYPLAL1Q5VWZ2 237 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 FAM83HQ6ZRV2 1179 aaPredicted RBP16.41■□□□□ 0.22
UBC-208ENST00000540700 GPR155Q7Z3F1 870 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 TRAPPC5Q8IUR0 188 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 OXR1Q8N573 874 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 LMX1AQ8TE12 382 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 AENQ8WTP8 325 aaKnown RBP16.41■□□□□ 0.22
UBC-208ENST00000540700 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBC-208ENST00000540700 DCUN1D1Q96GG9 259 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 MCMBPQ9BTE3 642 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 FUT8Q9BYC5 575 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 RMI1Q9H9A7 625 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 VPS37BQ9H9H4 285 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 RABGEF1Q9UJ41 708 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 KCNK6Q9Y257 313 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 CRYL1Q9Y2S2 319 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 MED16Q9Y2X0 877 aa16.41■□□□□ 0.22
UBC-208ENST00000540700 GPR89AB7ZAQ6 455 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 NDUFS3O75489 264 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 AHSGP02765 367 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 GSTA2P09210 222 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 GPR89BP0CG08 455 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 ITGB6P18564 788 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 PBLDP30039 288 aaPredicted RBP16.4■□□□□ 0.22
UBC-208ENST00000540700 FMO4P31512 558 aa16.4■□□□□ 0.22
UBC-208ENST00000540700 LEPRP48357 1165 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms