RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CDKN2BP42772 138 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 DYNLT1P63172 113 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 WASHC5Q12768 1159 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 MPP3Q13368 585 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 XRCC4Q13426 336 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 LAMB3Q13751 1172 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 NFE2L1Q14494 772 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 KCNAB1Q14722 419 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 TCEAL1Q15170 157 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 SLC1A5Q15758 541 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 CHRNA6Q15825 494 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 SIRPB2Q5JXA9 342 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 GPRC6AQ5T6X5 926 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 IZUMO3Q5VZ72 239 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 PAPD7Q5XG87 772 aaKnown RBP11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 TMEM220Q6QAJ8 160 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 MFSD7Q6UXD7 560 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 FAM151BQ6UXP7 276 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 ZNF517Q6ZMY9 492 aaPredicted RBP11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 FAM83HQ6ZRV2 1179 aaPredicted RBP11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 B4GALNT4Q76KP1 1039 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 GLT6D1Q7Z4J2 308 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 EFCAB3Q8N7B9 438 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 GALNT11Q8NCW6 608 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 MRGPRX2Q96LB1 330 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 LRFN5Q96NI6 719 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 UGT1A7Q9HAW7 530 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 UGT1A10Q9HAW8 530 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 UGT1A8Q9HAW9 530 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 LATS2Q9NRM7 1088 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 HRASLS2Q9NWW9 162 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 ACSL5Q9ULC5 683 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 VPS4AQ9UN37 437 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 FARSAQ9Y285 508 aaKnown RBP11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 PCDHGB7Q9Y5F8 929 aa11.73□□□□□ -0.53
CBX3P4-202ENST00000540428 ZNF106Q9H2Y7 1883 aaKnown RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 BLACEA4D250 179 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 MGAT4DA6NG13 374 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 OR2AG2A6NM03 316 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 TTLL8A6PVC2 850 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 GAPDHSO14556 408 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 CST8O60676 142 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 SCRG1O75711 98 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 DNAJB5O75953 348 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 PDGFAP04085 211 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 PYGMP11217 842 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 LPOP22079 712 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 CHRNA4P43681 627 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 PGDP52209 483 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 GSDMDP57764 484 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 NOMO1Q15155 1222 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 TMTC4Q5T4D3 741 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 ARMC6Q6NXE6 501 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 PID1Q7Z2X4 250 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 OR2L2Q8NH16 312 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 BLOC1S5Q8TDH9 187 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 ZNF501Q96CX3 271 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 OXNAD1Q96HP4 312 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 LINC00615Q96LM1 132 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 CCDC42Q96M95 316 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 RUFY1Q96T51 708 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 INSM2Q96T92 566 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 SLC25A23Q9BV35 468 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 TRIM55Q9BYV6 548 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 KIR3DX1Q9H7L2 352 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 AKIRIN1Q9H9L7 192 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 SYTL2Q9HCH5 934 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 LRRC4CQ9HCJ2 640 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 IMP3Q9NV31 184 aaKnown RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 KLHL8Q9P2G9 620 aaPredicted RBP11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 INTUQ9ULD6 942 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 PSMD13Q9UNM6 376 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 BTRCQ9Y297 605 aa11.72□□□□□ -0.53
CBX3P4-202ENST00000540428 MATN2O00339 956 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 STX7O15400 261 aaKnown RBP11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 GPR39O43194 453 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 PSTPIP1O43586 416 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 SPOPO43791 374 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 KLK3P07288 261 aaPredicted RBP11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 RAB40ALP0C0E4 278 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 PECAM1P16284 738 aaPredicted RBP11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 MSH3P20585 1137 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 COMTP21964 271 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 NDUFS1P28331 727 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 AKT1P31749 480 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 CA5AP35218 305 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 GPS2Q13227 327 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 IL10RAQ13651 578 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 BCL7AQ4VC05 210 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 FNBP1LQ5T0N5 605 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 CAPRIN2Q6IMN6 1127 aaKnown RBP11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 FAM199XQ6PEV8 388 aaPredicted RBP11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 CERS6Q6ZMG9 384 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 HPS6Q86YV9 775 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 TMEM126BQ8IUX1 230 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 ZNF567Q8N184 647 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 SLC25A41Q8N5S1 370 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 IPMKQ8NFU5 416 aa11.71□□□□□ -0.53
CBX3P4-202ENST00000540428 CPT1CQ8TCG5 803 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms