RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 CILP2Q8IUL8 1156 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 LMNTD2Q8IXW0 634 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 WDR83Q9BRX9 315 aaKnown RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 ABCG4Q9H172 646 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 P2RY12Q9H244 342 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 PLAC1Q9HBJ0 212 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 ZNF624Q9P2J8 865 aaPredicted RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 CPNE7Q9UBL6 633 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 UNC13CQ8NB66 2214 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 RHPN2P1A8MT19 583 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 PDZK1P1A8MUH7 402 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 GOLGA8KD6RF30 607 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 GOLGA8TH3BQL2 631 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 HYAL3O43820 417 aaPredicted RBP21.64■■□□□ 1.05
TRIM65-202ENST00000540128 NDUFS3O75489 264 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 FTH1P02794 183 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 OR56A5P0C7T3 313 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 RPL10P27635 214 aaKnown RBP21.64■■□□□ 1.05
TRIM65-202ENST00000540128 SLC19A1P41440 591 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 ADARP55265 1226 aaKnown RBP21.64■■□□□ 1.05
TRIM65-202ENST00000540128 RPA4Q13156 261 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 FRG1Q14331 258 aaKnown RBP21.64■■□□□ 1.05
TRIM65-202ENST00000540128 CRYMQ14894 314 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 CLCA4Q14CN2 919 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 SPANXN3Q5MJ09 141 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 RNF187Q5TA31 235 aaPredicted RBP21.64■■□□□ 1.05
TRIM65-202ENST00000540128 STEAP4Q687X5 459 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 CENPUQ71F23 418 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 SPRED1Q7Z699 444 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 CFAP206Q8IYR0 622 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 CEP112Q8N8E3 955 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 NOA1Q8NC60 698 aaKnown RBP21.64■■□□□ 1.05
TRIM65-202ENST00000540128 SH3KBP1Q96B97 665 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 CARD6Q9BX69 1037 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 UCK1Q9HA47 277 aa21.64■■□□□ 1.05
TRIM65-202ENST00000540128 A0A1W2PQM1 296 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 PFDN6O15212 129 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 B4GAT1O43505 415 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 TCEA3O75764 348 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 S1PR4O95977 384 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 MT-CO3P00414 261 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 PBLDP30039 288 aaPredicted RBP21.63■■□□□ 1.05
TRIM65-202ENST00000540128 SQSTM1Q13501 440 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 TRADDQ15628 312 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 GLE1Q53GS7 698 aaKnown RBP21.63■■□□□ 1.05
TRIM65-202ENST00000540128 HES3Q5TGS1 186 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 DCBLD1Q8N8Z6 715 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 CALML6Q8TD86 181 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 LPGAT1Q92604 370 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 SCNM1Q9BWG6 230 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 LRRN3Q9H3W5 708 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 COG4Q9H9E3 785 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 C20orf96Q9NUD7 363 aaPredicted RBP21.63■■□□□ 1.05
TRIM65-202ENST00000540128 ZC3H7BQ9UGR2 993 aaKnown RBP21.63■■□□□ 1.05
TRIM65-202ENST00000540128 NEUROG3Q9Y4Z2 214 aa21.63■■□□□ 1.05
TRIM65-202ENST00000540128 PTPRBP23467 1997 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 EIF3HO15372 352 aaKnown RBP eCLIP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 ZW10O43264 779 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 HALP42357 657 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 CCL7P80098 99 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 SLC7A5Q01650 507 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 HHEXQ03014 270 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 PDIA2Q13087 525 aaKnown RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 THOC5Q13769 683 aaKnown RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 SEPT7Q16181 437 aaKnown RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 CLPPQ16740 277 aaPredicted RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 CAPRIN2Q6IMN6 1127 aaKnown RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 ZDHHC24Q6UX98 284 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 CCNI2Q6ZMN8 369 aaPredicted RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 UNC5AQ6ZN44 842 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 LILRA3Q8N6C8 439 aaPredicted RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 BIRC8Q96P09 236 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 PHACTR1Q9C0D0 580 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 STN1Q9H668 368 aaKnown RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 POT1Q9NUX5 634 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 INTS10Q9NVR2 710 aaKnown RBP21.62■■□□□ 1.05
TRIM65-202ENST00000540128 IL1RAPL1Q9NZN1 696 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 VPS9D1Q9Y2B5 631 aa21.62■■□□□ 1.05
TRIM65-202ENST00000540128 LIN7AO14910 233 aaPredicted RBP21.61■■□□□ 1.05
TRIM65-202ENST00000540128 RPLP0P05388 317 aaKnown RBP21.61■■□□□ 1.05
TRIM65-202ENST00000540128 PLTPP55058 493 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 OR1D5P58170 312 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 PLOD1Q02809 727 aaPredicted RBP21.61■■□□□ 1.05
TRIM65-202ENST00000540128 BIRC2Q13490 618 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 RPE65Q16518 533 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 RBM12BQ8IXT5 1001 aaKnown RBP21.61■■□□□ 1.05
TRIM65-202ENST00000540128 OTUD6BQ8N6M0 293 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 Q8N9G6 341 aaPredicted RBP21.61■■□□□ 1.05
TRIM65-202ENST00000540128 FAM167BQ9BTA0 163 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.61■■□□□ 1.05
TRIM65-202ENST00000540128 FOXP3Q9BZS1 431 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 WWP1Q9H0M0 922 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 OR52A5Q9H2C5 316 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 SLC40A1Q9NP59 571 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 KLK13Q9UKR3 277 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 CLCA2Q9UQC9 943 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 CHMP2BQ9UQN3 213 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 MSRB2Q9Y3D2 182 aa21.61■■□□□ 1.05
TRIM65-202ENST00000540128 PCDHB1Q9Y5F3 818 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms