RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 FAR1Q8WVX9 515 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 RPL3LQ92901 407 aaKnown RBP13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 SEMA3CQ99985 751 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 ERVK-18Q9QC07 812 aa13.75□□□□□ -0.21
SCNN1A-215ENST00000540037 LOC100130705A0A1B0GUX0 176 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 KATNA1O75449 491 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 MYO1DO94832 1006 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 ERVPABLB-1P60509 514 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 PTPRRQ15256 657 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 DUSP28Q4G0W2 176 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 CCDC92Q53HC0 331 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 LETMD1Q6P1Q0 360 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SLC22A16Q86VW1 577 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 LGI2Q8N0V4 545 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SCML4Q8N228 414 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF555Q8NEP9 628 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 OR7A2PQ8NGA2 310 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 OR4L1Q8NH43 312 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 AURKBQ96GD4 344 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF641Q96N77 438 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 BARD1Q99728 777 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 CATSPERZQ9NTU4 200 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 ADGRE2Q9UHX3 823 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SNX5Q9Y5X3 404 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 DICER1Q9UPY3 1922 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SMIM35A0A1B0GVV1 85 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 C16orf96A6NNT2 1141 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 OR1I1O60431 355 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 PRKD3O94806 890 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 OR4Q2P0C623 313 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 PIK3CGP48736 1102 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 TPTEP56180 551 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 RAPSNQ13702 412 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 PTGR1Q14914 329 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 GTDC1Q4AE62 458 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 RFTN2Q52LD8 501 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 C6orf183Q5T699 404 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 TTC23Q5W5X9 447 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 GALNT7Q86SF2 657 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 ANKRD13BQ86YJ7 626 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 PHACTR4Q8IZ21 702 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 C10orf111Q8N326 155 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SIDT2Q8NBJ9 832 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 MAGED4Q96JG8 741 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SLCO3A1Q9UIG8 710 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 POLR3HQ9Y535 204 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 PPP2R3BQ9Y5P8 575 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 A0A1W2PQH9 124 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 RRN3P2A6NIE6 340 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 GPR39O43194 453 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 FTH1P02794 183 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 CNPP09543 421 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 UROSP10746 265 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF24P17028 368 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 CD6P30203 668 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SUOXP51687 545 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 STC1P52823 247 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 IL1RL1Q01638 556 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 MAPRE1Q15691 268 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 MRNIPQ6NTE8 343 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 TSPEARQ8WU66 669 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 THUMPD3Q9BV44 507 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 SMPD4Q9NXE4 827 aa13.74□□□□□ -0.21
SCNN1A-215ENST00000540037 UNCXA6NJT0 531 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 NIPSNAP2O75323 286 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 VPS4BO75351 444 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 TULP3O75386 442 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 MAGP20916 626 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 CYP2C18P33260 490 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 ACVRL1P37023 503 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 MLLT6P55198 1093 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 IL5RAQ01344 420 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SELENBP1Q13228 472 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SMN1Q16637 294 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SPATS1Q496A3 300 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 BRMS1LQ5PSV4 323 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 IL27RAQ6UWB1 636 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 OR2T12Q8NG77 320 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SLC47A1Q96FL8 570 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 MYOCQ99972 504 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 MIR1-1HGQ9H1L0 117 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 COMMD8Q9NX08 183 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 MBLAC1A4D2B0 266 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 M0R3G1 203 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 ARVCFO00192 962 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 GSTA4O15217 222 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 CHEK2O96017 543 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 THP07101 528 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 ITGB6P18564 788 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SIM2Q14190 667 aaPredicted RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SF3B4Q15427 424 aaKnown RBP eCLIP13.73□□□□□ -0.218e-10■■■■□ 19.3
SCNN1A-215ENST00000540037 CYP20A1Q6UW02 462 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms