RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SH2D5Q6ZV89 423 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 RAPH1Q70E73 1250 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 EXOC3L1Q86VI1 746 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 DCP2Q8IU60 420 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SRRM1Q8IYB3 904 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GOLGA6L1Q8N7Z2 621 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 LINC00615Q96LM1 132 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CCM2Q9BSQ5 444 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CAAP1Q9H8G2 361 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 LATS2Q9NRM7 1088 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SPATS2LQ9NUQ6 558 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SLC23A2Q9UGH3 650 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TRMT6Q9UJA5 497 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PILRBQ9UKJ0 227 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 DHRS7Q9Y394 339 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 A0A096LPK6 155 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 F8W8V4 182 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 VILLO15195 856 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 KMOO15229 486 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PYGBP11216 843 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CRABP2P29373 138 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ATP5DP30049 168 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SKIV2L2P42285 1042 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GNPDA1P46926 289 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 AFF3P51826 1226 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SRP54P61011 504 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 EIF2B5Q13144 721 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PLA2G4EQ3MJ16 856 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ZNF658BQ4V348 819 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PAQR3Q6TCH7 311 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SPATS2Q86XZ4 545 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 C4orf33Q8N1A6 199 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PIGKQ92643 395 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TLCD1Q96CP7 247 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TSSK1BQ9BXA7 367 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CARS2Q9HA77 564 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 POPDC3Q9HBV1 291 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GPAMQ9HCL2 828 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 FAM8A1Q9UBU6 413 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 A0A1B0GTW7 788 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 LRP3O75074 770 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CREB1P16220 341 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 KRT4P19013 534 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 AOAHP28039 575 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 UGT3A1Q6NUS8 523 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 XKR5Q6UX68 686 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CHST15Q7LFX5 561 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 OTOAQ7RTW8 1153 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 RD3Q7Z3Z2 195 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GALNT13Q8IUC8 556 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ZBTB2Q8N680 514 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 LILRA3Q8N6C8 439 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ANKRD49Q8WVL7 239 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ELMO1Q92556 727 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 LOXL4Q96JB6 756 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ATP6V1G3Q96LB4 118 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 STMN4Q9H169 189 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 VPS11Q9H270 941 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ARRDC1-AS1Q9H2J1 176 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SMOC1Q9H4F8 434 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PCMTD2Q9NV79 361 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 KLF15Q9UIH9 416 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TLK1Q9UKI8 766 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PLEKHM1Q9Y4G2 1056 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GPSM3Q9Y4H4 160 aa18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 DNMT3AQ9Y6K1 912 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PATE3B3GLJ2 98 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 MAGEC1O60732 1142 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 EPN2O95208 641 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 MPOP05164 745 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 GNSP15586 552 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ZNF37AP17032 561 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CCNFP41002 786 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ID4P47928 161 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 NXPH1P58417 271 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ARHGAP8P85298 464 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 IRF9Q00978 393 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 BOP1Q14137 746 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ZNF542PQ5EBM4 170 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PEAR1Q5VY43 1037 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SYT12Q8IV01 421 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 HID1Q8IV36 788 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CPNE9Q8IYJ1 553 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 OXR1Q8N573 874 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 OR2L2Q8NH16 312 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ACMSDQ8TDX5 336 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 INPP5DQ92835 1189 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 PKNOX2Q96KN3 472 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SEMA4GQ9NTN9 838 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 KLHL42Q9P2K6 505 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 SUSD2Q9UGT4 822 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ACOT9Q9Y305 439 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 DGKBQ9Y6T7 804 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 CACNA1AO00555 2505 aa18.58■□□□□ 0.56
TNFRSF1A-213ENST00000540022 C17orf113A0A1B0GUU1 675 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 A0A1B0GVT2 93 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 MGAT4DA6NG13 374 aa18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 TOP3BO95985 862 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-213ENST00000540022 ACP5P13686 325 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms