RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CALML6Q8TD86 181 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 LPGAT1Q92604 370 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 C9orf72Q96LT7 481 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 TCF12Q99081 682 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 FAM167BQ9BTA0 163 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 SCHIP1Q9P0W5 487 aaPredicted RBP12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 SLC17A6Q9P2U8 582 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 PSMD13Q9UNM6 376 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 CRYL1Q9Y2S2 319 aa12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 PTPRZ1P23471 2315 aaPredicted RBP12.48□□□□□ -0.41
TSPAN9-207ENST00000539631 C17orf113A0A1B0GUU1 675 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 QSOX1O00391 747 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 PFDN6O15212 129 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 FTH1P02794 183 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 FTH1P19P0C7X4 201 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 BRAFP15056 766 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 RPS3P23396 243 aaKnown RBP eCLIP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 GPX6P59796 221 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 ZNF658BQ4V348 819 aaPredicted RBP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 CCDC157Q569K6 752 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 CTSL3PQ5NE16 218 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 PERM1Q5SV97 790 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 TEDDM1Q5T9Z0 273 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 METRNLQ641Q3 311 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 PTRHD1Q6GMV3 140 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 IYDQ6PHW0 289 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 NAPRTQ6XQN6 538 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 LRRC6Q86X45 466 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 IFT20Q8IY31 132 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 C2CD4AQ8NCU7 369 aaPredicted RBP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 MAPK15Q8TD08 544 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 SLC37A2Q8TED4 501 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 ELMO1Q92556 727 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 FAM129AQ9BZQ8 928 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 COG4Q9H9E3 785 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 VPS37BQ9H9H4 285 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 PPANQ9NQ55 473 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 EVA1BQ9NVM1 165 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 INTS10Q9NVR2 710 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 MTRF1LQ9UGC7 380 aaKnown RBP12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 GNPTGQ9UJJ9 305 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 FBXO5Q9UKT4 447 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 RNF215Q9Y6U7 377 aa12.47□□□□□ -0.41
TSPAN9-207ENST00000539631 KLHL33A6NCF5 533 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 PPM1DO15297 605 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 RFPL3O75679 317 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 HAUS5O94927 633 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 TRIM16O95361 564 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 SLC2A4P14672 509 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 GLB1P16278 677 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 CCR7P32248 378 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 MGAT5Q09328 741 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 CUL1Q13616 776 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 FRG1Q14331 258 aaKnown RBP12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 BRD3Q15059 726 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 AGAP9Q5VTM2 703 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 ZNF549Q6P9A3 640 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 CNSTQ6PJW8 725 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 WASH2PQ6VEQ5 465 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 DGLUCYQ7Z3D6 616 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 CNTN4Q8IWV2 1026 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 SFRP1Q8N474 314 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 CCDC74AQ96AQ1 378 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 BIRC8Q96P09 236 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 FMO2Q99518 471 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 WWP1Q9H0M0 922 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 WASH6PQ9NQA3 447 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 SMYD2Q9NRG4 433 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 MOCS1Q9NZB8 636 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 ZNF624Q9P2J8 865 aaPredicted RBP12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 LRIT1Q9P2V4 623 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 NFU1Q9UMS0 254 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 APOBEC2Q9Y235 224 aaKnown RBP12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 VPS9D1Q9Y2B5 631 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 PCDHB1Q9Y5F3 818 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 PCDHGA1Q9Y5H4 931 aa12.46□□□□□ -0.41
TSPAN9-207ENST00000539631 COL27A1Q8IZC6 1860 aaPredicted RBP12.46□□□□□ -0.42
TSPAN9-207ENST00000539631 PTPRBP23467 1997 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 KIR2DS5A0A0G2JLQ3 304 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 PRAMEF33A0A0G2JMD5 474 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 A0A0G2JNG1 304 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 SLC5A10A0PJK1 596 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 OR5K4A6NMS3 321 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 OR52A4PA6NMU1 304 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 F8W8V4 182 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 KIR2DS3K7RE56 304 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 CASC3O15234 703 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 NIPSNAP2O75323 286 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 SLU7O95391 586 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 ESR1P03372 595 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 GSTA2P09210 222 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 GSTM1P09488 218 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 PKMP14618 531 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 GABRB3P28472 473 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms