RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 POLR2IP36954 125 aaKnown RBP13.86□□□□□ -0.19
UBE3B-210ENST00000539599 CCL23P55773 120 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 RHOAP61586 193 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 ERVK-8P63133 956 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 PMS2P3Q13401 168 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 NKG7Q16617 165 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 AP5B1Q2VPB7 878 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 SLC36A3Q495N2 470 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 PABPC1LQ4VXU2 614 aaKnown RBP13.86□□□□□ -0.19
UBE3B-210ENST00000539599 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 GLYATQ6IB77 296 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 CYP20A1Q6UW02 462 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 ENPP6Q6UWR7 440 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 DLEU7Q6UYE1 221 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 RFLNAQ6ZTI6 216 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 APCDD1Q8J025 514 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 DDI1Q8WTU0 396 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 FIG4Q92562 907 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 IPPKQ9H8X2 491 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 EXD2Q9NVH0 621 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 VAPAQ9P0L0 249 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 LHX3Q9UBR4 397 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 SUN2Q9UH99 717 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 ANAPC2Q9UJX6 822 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 LRFN2Q9ULH4 789 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 TAPBPO15533 448 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 CHEK2O96017 543 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 CSKP41240 450 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 RANBP1P43487 201 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 PIGFQ07326 219 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 CYBRD1Q53TN4 286 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 ADGRG2Q8IZP9 1017 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 SPATA17Q96L03 361 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 AFF4Q9UHB7 1163 aaKnown RBP13.86□□□□□ -0.19
UBE3B-210ENST00000539599 MBD1Q9UIS9 605 aaPredicted RBP13.86□□□□□ -0.19
UBE3B-210ENST00000539599 SCN5AQ14524 2016 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 NOBOXO60393 691 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 CLDN7O95471 211 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 PRAMEF1O95521 474 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 SLC2A4P14672 509 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 CD247P20963 164 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 TTPAP49638 278 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 BNIP2Q12982 314 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 GTF2H2Q13888 395 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 GPR107Q5VW38 600 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 OGFOD2Q6N063 350 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 GTF2H2CQ6P1K8 395 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 DEFB128Q7Z7B8 93 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 TSPAN33Q86UF1 283 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 SERPINA9Q86WD7 417 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 RNF175Q8N4F7 328 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 GAB3Q8WWW8 586 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 MYLIPQ8WY64 445 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 HSPBAP1Q96EW2 488 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 EGFL8Q99944 293 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 HAUS8Q9BT25 410 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 TRIM54Q9BYV2 358 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 BRINP2Q9C0B6 783 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 LEF1Q9UJU2 399 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-210ENST00000539599 ZNF711Q9Y462 761 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 H0Y858 1186 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 NRG2O14511 850 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-210ENST00000539599 GAPDHSO14556 408 aaPredicted RBP13.85□□□□□ -0.19
UBE3B-210ENST00000539599 STX16O14662 325 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 LSM1O15116 133 aaKnown RBP13.85□□□□□ -0.19
UBE3B-210ENST00000539599 KLK8O60259 260 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 CLDN11O75508 207 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 ATE1O95260 518 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 SHMT2P34897 504 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 HPCAP84074 193 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 PTRHD1Q6GMV3 140 aaKnown RBP13.85□□□□□ -0.19
UBE3B-210ENST00000539599 PRMT9Q6P2P2 845 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 NCEH1Q6PIU2 408 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 TMEM26Q6ZUK4 368 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 ZFAND4Q86XD8 727 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 FAM126BQ8IXS8 530 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 PEX13Q92968 403 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.85□□□□□ -0.192e-12■■■■■ 49
UBE3B-210ENST00000539599 TRIM15Q9C019 465 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.85□□□□□ -0.19
UBE3B-210ENST00000539599 SMURF2Q9HAU4 748 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 NTN4Q9HB63 628 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 RHBDL2Q9NX52 303 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 IL17CQ9P0M4 197 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 VPS51Q9UID3 782 aa13.85□□□□□ -0.19
UBE3B-210ENST00000539599 A0A1B0GVM2 712 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-210ENST00000539599 KANSL1LA0AUZ9 987 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 CLGNO14967 610 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 FFAR2O15552 330 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 RASAL1O95294 804 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 MLYCDO95822 493 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 GSNP06396 782 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 NR4A1P22736 598 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 RPS9P46781 194 aaKnown RBP13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ANKDD1AQ495B1 522 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 SPATA19Q7Z5L4 167 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 OR10A6Q8NH74 314 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 C12orf43Q96C57 262 aaKnown RBP13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ISOC1Q96CN7 298 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms