RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TMEM121BQ9BXQ6 578 aaPredicted RBP15.44■□□□□ 0.06
RPAIN-206ENST00000539417 ABCG4Q9H172 646 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 P2RY12Q9H244 342 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 LRRN3Q9H3W5 708 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 EVA1BQ9NVM1 165 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 ANGPTL2Q9UKU9 493 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 CHMP2BQ9UQN3 213 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 CEP295Q9C0D2 2601 aa15.44■□□□□ 0.06
RPAIN-206ENST00000539417 A0A1W2PNU3 283 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-206ENST00000539417 ESYT3A0FGR9 886 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 MAGEB16A2A368 324 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 PMS2P1A4D2B8 440 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 USP1O94782 785 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 JUPP14923 745 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 CD1CP29017 333 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 CTBP1Q13363 440 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 CRYMQ14894 314 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 BRD3Q15059 726 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 RPE65Q16518 533 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 TYSND1Q2T9J0 566 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 AMZ1Q400G9 498 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 LYPLAL1Q5VWZ2 237 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 NEPROQ6NW34 567 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 ZDHHC24Q6UX98 284 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 WASH2PQ6VEQ5 465 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 CERS6Q6ZMG9 384 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 USP53Q70EK8 1073 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 TMPRSS12Q86WS5 348 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 OTUD6BQ8N6M0 293 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 OR6C4Q8NGE1 309 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 KIF18AQ8NI77 898 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.43■□□□□ 0.064e-10■■■■■ 86.3
RPAIN-206ENST00000539417 COG4Q9H9E3 785 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 RDH14Q9HBH5 336 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 SARS2Q9NP81 518 aaKnown RBP15.43■□□□□ 0.06
RPAIN-206ENST00000539417 WASH6PQ9NQA3 447 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 SLC17A6Q9P2U8 582 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 CLCA2Q9UQC9 943 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 NEUROG3Q9Y4Z2 214 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 TEX264Q9Y6I9 313 aa15.43■□□□□ 0.06
RPAIN-206ENST00000539417 IGHV1OR21-1A0A087WYE8 117 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 KIR2DS5A0A0G2JLQ3 304 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 A0A0G2JNG1 304 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 KIR2DS3K7RE56 304 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 KIF2AO00139 706 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-206ENST00000539417 AGRPO00253 132 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 KCNJ13O60928 360 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 AP2A2O94973 939 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 HOXB3P14651 431 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-206ENST00000539417 PNLIPP16233 465 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 VCLP18206 1134 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 PGAM1P18669 254 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 XRCC1P18887 633 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-206ENST00000539417 CSF2RBP32927 897 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 KIR2DS5Q14953 304 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 HIF1AQ16665 826 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 CTSL3PQ5NE16 218 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 UNC5AQ6ZN44 842 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 ZNF574Q6ZN55 896 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-206ENST00000539417 SLC9B2Q86UD5 537 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 GALNT15Q8N3T1 639 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 LRRN4CLQ8ND94 238 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 HM13Q8TCT9 377 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 LPGAT1Q92604 370 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 CFAP36Q96G28 342 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 NUDT22Q9BRQ3 303 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 FOXP3Q9BZS1 431 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 C20orf96Q9NUD7 363 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-206ENST00000539417 TMEM9Q9P0T7 183 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 MSRB2Q9Y3D2 182 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 FAM169AQ9Y6X4 670 aa15.42■□□□□ 0.06
RPAIN-206ENST00000539417 C17orf113A0A1B0GUU1 675 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 CSO75390 466 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 S1PR4O95977 384 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 TUBB4AP04350 444 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 ERVK-10P10266 1014 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 CDK4P11802 303 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 CCR7P32248 378 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 SLC1A2P43004 574 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 TTPAP49638 278 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 CSE1LP55060 971 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 MPP1Q00013 466 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 PDIA2Q13087 525 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 LONRF1Q17RB8 773 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 HSP90AA5PQ58FG0 334 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 DNAJC21Q5F1R6 531 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 ARMC3Q5W041 872 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 ZNF470Q6ECI4 717 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 CAPRIN2Q6IMN6 1127 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 TRMT10BQ6PF06 316 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 CILP2Q8IUL8 1156 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 VRK3Q8IV63 474 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 PDIK1LQ8N165 341 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 GATA6Q92908 595 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 ART4Q93070 314 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 BIRC8Q96P09 236 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 GFM1Q96RP9 751 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 OR52A5Q9H2C5 316 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 SLC40A1Q9NP59 571 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms