RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 SLC25A41Q8N5S1 370 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 PLA2G15Q8NCC3 412 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 LPCAT1Q8NF37 534 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 OR4D9Q8NGE8 314 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 CPT1CQ8TCG5 803 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 CXorf40AQ8TE69 158 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 STARD8Q92502 1023 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 APOL2Q9BQE5 337 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 EFHD1Q9BUP0 239 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 ADGRE3Q9BY15 652 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 FRMD8Q9BZ67 464 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 DPEP2Q9H4A9 486 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 SUV39H2Q9H5I1 410 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 ANKZF1Q9H8Y5 726 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 XAB2Q9HCS7 855 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 MRPL40Q9NQ50 206 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 TMEM9Q9P0T7 183 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 PDP2Q9P2J9 529 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 CHKBQ9Y259 395 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 KCTD3Q9Y597 815 aa12.34□□□□□ -0.43
CLSTN3-208ENST00000538933 A0A1W2PQ67 120 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TTLL8A6PVC2 850 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 MKRN2OSH3BPM6 223 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 CPP00450 1065 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 FGF1P05230 155 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 MMP2P08253 660 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 FURINP09958 794 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 HLA-DPA1P20036 260 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TCN2P20062 427 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 MPSTP25325 297 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 CSF2RBP32927 897 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 CARSP49589 748 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 ARL4CP56559 192 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 MC1RQ01726 317 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 CDH17Q12864 832 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TRAF2Q12933 501 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 GALNT3Q14435 633 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 HIF1AQ16665 826 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 DNAJC21Q5F1R6 531 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 NKAIN2Q5VXU1 208 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 ANKRD22Q5VYY1 191 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 NRROSQ86YC3 692 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 PDIK1LQ8N165 341 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 NAT8LQ8N9F0 302 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 MCUQ8NE86 351 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 OR52K1Q8NGK4 314 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 KIAA1143Q96AT1 154 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TCTN2Q96GX1 697 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 MRGPRX2Q96LB1 330 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 ZNF641Q96N77 438 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 FMO2Q99518 471 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TDRD1Q9BXT4 1180 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TSPYL1Q9H0U9 437 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 GRHL1Q9NZI5 618 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 DKK3Q9UBP4 350 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TLK1Q9UKI8 766 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 NFU1Q9UMS0 254 aa12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TMEM184BQ9Y519 407 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 MRPS18BQ9Y676 258 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-208ENST00000538933 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 TNFRSF10CO14798 259 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 TMEM63AO94886 807 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 SUN1O94901 812 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 NDST3O95803 873 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 AGTP01019 485 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 LDLRP01130 860 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 IVDP26440 423 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 MAGEA6P43360 314 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 GPR3P46089 330 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 RAB15P59190 212 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 POLR2LP62875 67 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 MC2RQ01718 297 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 MTM1Q13496 603 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 TRADDQ15628 312 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 EIF2S3LQ2VIR3 472 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 C16orf46Q6P387 395 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 CASC4Q6P4E1 433 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 LRRC8BQ6P9F7 803 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 CENPUQ71F23 418 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 OR56A4Q8NGH8 313 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 FBXO25Q8TCJ0 367 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 SEC14L1Q92503 715 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 TEFMQ96QE5 360 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 GORASP1Q9BQQ3 440 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 PARD6BQ9BYG5 372 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 CASS4Q9NQ75 786 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 BFARQ9NZS9 450 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 SAMD15Q9P1V8 674 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 ST14Q9Y5Y6 855 aa12.32□□□□□ -0.44
CLSTN3-208ENST00000538933 IGHV1OR21-1A0A087WYE8 117 aa12.31□□□□□ -0.44
CLSTN3-208ENST00000538933 UQCRHLA0A096LP55 91 aa12.31□□□□□ -0.44
CLSTN3-208ENST00000538933 RHPN2P1A8MT19 583 aa12.31□□□□□ -0.44
CLSTN3-208ENST00000538933 TCP11X1B4DZS4 312 aa12.31□□□□□ -0.44
CLSTN3-208ENST00000538933 PPM1DO15297 605 aa12.31□□□□□ -0.44
CLSTN3-208ENST00000538933 ERLIN1O75477 346 aa12.31□□□□□ -0.44
CLSTN3-208ENST00000538933 SORBS2O94875 1100 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-208ENST00000538933 PGLSO95336 258 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms