RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 HSPA12BQ96MM6 686 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SPATA5L1Q9BVQ7 753 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 FAM126AQ9BYI3 521 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PRDM8Q9NQV8 689 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 ENAMQ9NRM1 1142 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 TLL2Q9Y6L7 1015 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 NEXMIFQ5QGS0 1516 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 COL15A1P39059 1388 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 CBX5P45973 191 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 RPS3AP61247 264 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 EFEMP1Q12805 493 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 NTRK3Q16288 839 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 FAM98CQ17RN3 349 aaKnown RBP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SUPT20HL1Q3ZLR7 823 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 EPS8L1Q8TE68 723 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSMD1-215ENST00000537824 HMGXB4Q9UGU5 601 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 SETBP1Q9Y6X0 1596 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 PTPN13Q12923 2485 aa5.61□□□□□ -1.51
CSMD1-215ENST00000537824 MEN1O00255 615 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RFXANKO14593 260 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DCLK1O15075 740 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RORAP35398 523 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 LRRC38Q5VT99 294 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 LRRC66Q68CR7 880 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ITPKCQ96DU7 683 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM176AQ96HP8 235 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DDX4Q9NQI0 724 aaKnown RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DDX43Q9NXZ2 648 aaKnown RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FAM53CQ9NYF3 392 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 EBF1Q9UH73 591 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ARFGEF2Q9Y6D5 1785 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 AGAP5A6NIR3 686 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PITPNM1O00562 1244 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ENTPD6O75354 484 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 MTPNP58546 118 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ADGRF2Q8IZF7 708 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PACRGLQ8N7B6 248 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ATAD1Q8NBU5 361 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SLC22A8Q8TCC7 542 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SLC38A7Q9NVC3 462 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ECM29Q5VYK3 1845 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 A6NHS1 94 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DPYSL4O14531 572 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SEMA5AQ13591 1074 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 NFE2L1Q14494 772 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 MPPE1Q53F39 396 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 QSOX2Q6ZRP7 698 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RAB11FIP2Q7L804 512 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CHST15Q7LFX5 561 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PHACTR4Q8IZ21 702 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RASGEF1CQ8N431 466 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RHBDF1Q96CC6 855 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TMED9Q9BVK6 235 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PRMT7Q9NVM4 692 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ERVK-19Q9WJR5 959 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PCDHB12Q9Y5F1 795 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PCDHGA4Q9Y5G9 962 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CRB1P82279 1406 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SMIM30A4D0T7 59 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CYP27B1O15528 508 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 SGCEO43556 437 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TULP3O75386 442 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 IFNA10P01566 189 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 IFNA4P05014 189 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CD86P42081 329 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PRKCDQ05655 676 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FADDQ13158 208 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 IER5Q5VY09 327 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 NOTUMQ6P988 496 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF438Q7Z4V0 828 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 OR4C6Q8NH72 309 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PIGXQ8TBF5 258 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 COA1Q9GZY4 146 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 C17orf75Q9HAS0 396 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF490Q9ULM2 529 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PCDHGB3Q9Y5G1 929 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PEAK1Q9H792 1746 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ABCB7O75027 752 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RBMXL2O75526 392 aaKnown RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CYBBP04839 570 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CYP2A7P20853 494 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ADAM8P78325 824 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 KRBOX4Q5JUW0 171 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 MIB1Q86YT6 1006 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TICAM1Q8IUC6 712 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 PHTF2Q8N3S3 785 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 FBXO32Q969P5 355 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM203Q969S6 136 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 IL4I1Q96RQ9 567 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 STK32BQ9NY57 414 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CHST10O43529 356 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 DBIP07108 87 aaKnown RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 RPL19P84098 196 aaKnown RBP5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CTBP1Q13363 440 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 TMED4Q7Z7H5 227 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 MARCH9Q86YJ5 346 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 MFSD8Q8NHS3 518 aa5.6□□□□□ -1.51
CSMD1-215ENST00000537824 CPNE2Q96FN4 548 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms