RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 GOT1P17174 413 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 NUP62P37198 522 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CCR10P46092 362 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 HSF2Q03933 536 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 GK3PQ14409 553 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 GRM3Q14832 879 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CRY1Q16526 586 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 RUNDC3AQ59EK9 446 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 RAP1GAP2Q684P5 730 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 INTS5Q6P9B9 1019 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 LIX1LQ8IVB5 337 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM199Q8N511 208 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PAPD5Q8NDF8 572 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 OR52K2Q8NGK3 314 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 PARK7Q99497 189 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 NTPCRQ9BSD7 190 aaKnown RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MLPHQ9BV36 600 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 SNTG1Q9NSN8 517 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 RBM22Q9NW64 420 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTPRD-213ENST00000537002 MLXQ9UH92 298 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF112Q9UJU3 913 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 CLEC4AQ9UMR7 237 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 KCNH4Q9UQ05 1017 aa5.34□□□□□ -1.55
PTPRD-213ENST00000537002 GNG14A0A1W2PPG7 69 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF195O14628 629 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 MYCLP1P12525 358 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 PRKCAP17252 672 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 ALDH7A1P49419 539 aaKnown RBP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 PTPN5P54829 565 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 PPP2R2BQ00005 443 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 TWF1Q12792 350 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 SLC13A2Q13183 592 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 CAMK1Q14012 370 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 EFCAB12Q6NXP0 572 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 CDHR3Q6ZTQ4 885 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 DPP9Q86TI2 863 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 FAM35AQ86V20 835 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 SLC34A3Q8N130 599 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 CYP4Z2PQ8N1L4 340 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 DEPDC4Q8N2C3 294 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 AKAP1Q92667 903 aaKnown RBP eCLIP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 AP2M1Q96CW1 435 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 MYRFLQ96LU7 910 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF578Q96N58 590 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 CRLS1Q9UJA2 301 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 GSTK1Q9Y2Q3 226 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 LAMB2P55268 1798 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 PSMD10O75832 226 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 COX7A2P14406 83 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 PTPN1P18031 435 aaKnown RBP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 MAGEA12P43365 314 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 SLC15A1P46059 708 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 PLA2G16P53816 162 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 FKBP1BP68106 108 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 CLDN10P78369 228 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 SPP2Q13103 211 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 SEMA3BQ13214 749 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 LAPTM5Q13571 262 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 NPTX1Q15818 432 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 SLC35G1Q2M3R5 365 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 UBE2UQ5VVX9 321 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 BICRALQ6AI39 1079 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 TMPRSS11AQ6ZMR5 421 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 MPP5Q8N3R9 675 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 OR5B17Q8NGF7 314 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 CINPQ9BW66 212 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 PRKD2Q9BZL6 878 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 DCSTAMPQ9H295 470 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 TTYH1Q9H313 450 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 ZFP14Q9HCL3 533 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF304Q9HCX3 659 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 WDR6Q9NNW5 1121 aaKnown RBP5.34□□□□□ -1.56
PTPRD-213ENST00000537002 POLE3Q9NRF9 147 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 SETD4Q9NVD3 440 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 C14orf119Q9NWQ9 140 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM181Q9P2C4 612 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 TRHDEQ9UKU6 1024 aa5.34□□□□□ -1.56
PTPRD-213ENST00000537002 MDM4O15151 490 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GTF2E2P29084 291 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HTR2BP41595 481 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MLLT3P42568 568 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ADARB1P78563 741 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SPIBQ01892 262 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 NFIAQ12857 509 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TAF1CQ15572 869 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TBRG1Q3YBR2 411 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF362Q5T0B9 420 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GTF2IRD2BQ6EKJ0 949 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PGBD2Q6P3X8 592 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GDPGP1Q6ZNW5 385 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CHMP1BQ7LBR1 199 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 VN1R5Q7Z5H4 357 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GTF2IRD2Q86UP8 949 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 KIF18BQ86Y91 864 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SPATA2LQ8IUW3 424 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 RBFAQ8N0V3 343 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 EDEM1Q92611 657 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CEP295NLQ96MC4 621 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SLC22A4Q9H015 551 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 NMRK2Q9NPI5 230 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms