RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 TCP11X1B4DZS4 312 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 RRP9O43818 475 aaKnown RBP22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 NUAK1O60285 661 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 KERAO60938 352 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 IGHV4-34P06331 123 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 HOXC4P09017 264 aaPredicted RBP22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 SBK3P0C264 359 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 BGNP21810 368 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 ASPHQ12797 758 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 CHI3L2Q15782 390 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 ATG16L1Q676U5 607 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 PIWIL4Q7Z3Z4 852 aaKnown RBP22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 LRRTM4Q86VH4 590 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 TMEM159Q96B96 161 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 CCDC126Q96EE4 140 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 CHMP6Q96FZ7 201 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 SPACA7Q96KW9 195 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 LINC00615Q96LM1 132 aaPredicted RBP22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 DLGAP2Q9P1A6 1054 aa22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 TSR3Q9UJK0 312 aaKnown RBP22.53■■□□□ 1.2
RBFOX1-206ENST00000535565 GMNCA6NCL1 334 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 PRAMEF26H0Y7S4 382 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 CHUKO15111 745 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 LILRB5O75023 590 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 SMIM24O75264 130 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 H2AFYO75367 372 aaKnown RBP22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 PDGFBP01127 241 aaPredicted RBP22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 VIMP08670 466 aaKnown RBP22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 ATP5F1P24539 256 aaPredicted RBP22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 PBLDP30039 288 aaPredicted RBP22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 PRKAA2P54646 552 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 GBX1Q14549 363 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 OR4D1Q15615 310 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 TSNQ15631 228 aaKnown RBP22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 CRTC3Q6UUV7 619 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 ADAMTSL2Q86TH1 951 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 PCED1AQ9H1Q7 454 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 EPN3Q9H201 632 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 OXSMQ9NWU1 459 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 HS3ST3A1Q9Y663 406 aa22.52■■□□□ 1.2
RBFOX1-206ENST00000535565 C17orf113A0A1B0GUU1 675 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 K7ESF4 209 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 CDC7O00311 574 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 KLF11O14901 512 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 AXIN1O15169 862 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 TRIM13O60858 407 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 TPBGLP0DKB5 382 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 AOC1P19801 751 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 CLDN2P57739 230 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 KIAA1024LP59773 190 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 LIPMQ5VYY2 423 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 NEK10Q6ZWH5 1172 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 FAM160A2Q8N612 972 aaPredicted RBP22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 BIRC7Q96CA5 298 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 UHRF1Q96T88 793 aaPredicted RBP22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 RMI1Q9H9A7 625 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 SPATA6Q9NWH7 488 aaPredicted RBP22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 FAM8A1Q9UBU6 413 aa22.51■■□□□ 1.19
RBFOX1-206ENST00000535565 POM121BA6NF01 834 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 TOR1BO14657 336 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 LIN7AO14910 233 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 GPC4O75487 556 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 MPC1LP0DKB6 136 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 KELP23276 732 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 USP39Q53GS9 565 aaKnown RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 FRA10AC1Q70Z53 315 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 SLC22A9Q8IVM8 553 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 ZNF547Q8IVP9 402 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 FRMD1Q8N878 549 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 HM13Q8TCT9 377 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 SKA2Q8WVK7 121 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 GLMNQ92990 594 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 EXT2Q93063 718 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 ZNF317Q96PQ6 595 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 ATOH8Q96SQ7 321 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 DNMT3AQ9Y6K1 912 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 EML5Q05BV3 1969 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 KLHL33A6NCF5 533 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 KMOO15229 486 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 GRID2O43424 1007 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 PI15O43692 258 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 DLX3O60479 287 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 POP7O75817 140 aaKnown RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 SLCO2B1O94956 709 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 FGF3P11487 239 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 GRK2P25098 689 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 HTR1BP28222 390 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 SEC24CP53992 1094 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 YPEL5P62699 121 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 PLOD1Q02809 727 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 GABPB1Q06547 395 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 GPSM1Q86YR5 675 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 OR2L2Q8NH16 312 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 SNX19Q92543 992 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 NSRP1Q9H0G5 558 aaKnown RBP22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 ZNHIT2Q9UHR6 403 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 IKZF3Q9UKT9 509 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 TMCO1Q9UM00 188 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 SLC17A4Q9Y2C5 497 aa22.5■■□□□ 1.19
RBFOX1-206ENST00000535565 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms