RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RAB40A	Q8WXH6	277 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NCSTN	Q92542	709 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CNOT9	Q92600	299 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TCEAL4	Q96EI5	215 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	P2RY11	Q96G91	374 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RSRC1	Q96IZ7	334 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CNDP2	Q96KP4	475 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FYTTD1	Q96QD9	318 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KRTAP4-12	Q9BQ66	201 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NPL	Q9BXD5	320 aa	Predicted RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ITPA	Q9BY32	194 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KRTAP4-8	Q9BYQ9	185 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NUAK2	Q9H093	628 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BRF2	Q9HAW0	419 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PCDHB16	Q9NRJ7	776 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KRT84	Q9NSB2	600 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TAS2R10	Q9NYW0	307 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HMG20B	Q9P0W2	317 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	UPB1	Q9UBR1	384 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC25A13	Q9UJS0	675 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SARDH	Q9UL12	918 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ISY1	Q9ULR0	285 aa	Known RBP	4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	OSGIN2	Q9Y236	505 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DTX4	Q9Y2E6	619 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PSAT1	Q9Y617	370 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ABCA4	P78363	2273 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KIAA1549L	Q6ZVL6	1849 aa		4.62	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SHANK1	Q9Y566	2161 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442		A0A1W2PQM1	296 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442		B4DLN1	442 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TRDMT1	O14717	391 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GCAT	O75600	419 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GGPS1	O95749	300 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MLYCD	O95822	493 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	U2AF2	P26368	475 aa	Known RBP eCLIP	4.61	□□□□□ -1.67	8e-7	■■■■□ 21
ECHDC1-223	ENST00000534442	GSTM2	P28161	218 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RBMS1	P29558	406 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PTPN9	P43378	593 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SOX2	P48431	317 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MRPL12	P52815	198 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	UFM1	P61960	85 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ASIC1	P78348	528 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FCHO2	Q0JRZ9	810 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TGIF1	Q15583	401 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC18A3	Q16572	532 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FAM153C	Q494X1	144 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC9B1	Q4ZJI4	515 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GLE1	Q53GS7	698 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LACTB2	Q53H82	288 aa	Predicted RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZNF667	Q5HYK9	610 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RANBP10	Q6VN20	620 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PXK	Q7Z7A4	578 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CPLX4	Q7Z7G2	160 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZCCHC9	Q8N567	271 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DYNLL2	Q96FJ2	89 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	B3GALT6	Q96L58	329 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ADAD1	Q96M93	576 aa	Known RBP	4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MBOAT7	Q96N66	472 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TIMP4	Q99727	224 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TRIM2	Q9C040	744 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PDCL3	Q9H2J4	239 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GHITM	Q9H3K2	345 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TOR3A	Q9H497	397 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MLXIPL	Q9NP71	852 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ARL15	Q9NXU5	204 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CLIC5	Q9NZA1	410 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KCND2	Q9NZV8	630 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SERGEF	Q9UGK8	458 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GPR34	Q9UPC5	381 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GINS2	Q9Y248	185 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ABCB11	O95342	1321 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CCDC171	Q6TFL3	1326 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HERC2	O95714	4834 aa		4.61	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SON	P18583	2426 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TCP11X1	B4DZS4	312 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LDLRAD4	O15165	306 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TIMM44	O43615	452 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	JTB	O76095	146 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LDOC1	O95751	146 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CHRM4	P08173	479 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NHLRC4	P0CG21	123 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	COX7A2	P14406	83 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	COX6B1	P14854	86 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	WT1	P19544	449 aa	Predicted RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SSTR2	P30874	369 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	STAT1	P42224	750 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LEPR	P48357	1165 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	STAT2	P52630	851 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KRTAP10-2	P60368	255 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RPS3A	P61247	264 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RPS6	P62753	249 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	IL9R	Q01113	521 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RHAG	Q02094	409 aa		4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CALD1	Q05682	793 aa	Known RBP	4.6	□□□□□ -1.67
ECHDC1-223	ENST00000534442	IK	Q13123	557 aa	Predicted RBP	4.6	□□□□□ -1.67

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