RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 CDKN2AIPNLQ96HQ2 116 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 LINC00615Q96LM1 132 aaPredicted RBP9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 C9orf72Q96LT7 481 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 NAP1L3Q99457 506 aaPredicted RBP9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 TSSK1BQ9BXA7 367 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 TBC1D10AQ9BXI6 508 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 RAB33BQ9H082 229 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 CPNE5Q9HCH3 593 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 PDE7BQ9NP56 450 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 KLHL3Q9UH77 587 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 TMPRSS11EQ9UL52 423 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 KCTD3Q9Y597 815 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 CAPN6Q9Y6Q1 641 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 ANKRD11Q6UB99 2663 aaPredicted RBP9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 FAM208BQ5VWN6 2430 aa9.43□□□□□ -0.9
FOXRED1-216ENST00000533839 UBA6A0AVT1 1052 aaPredicted RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 OR52A4PA6NMU1 304 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 AGAP14A8MT82 685 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 C9orf172C9J069 976 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 H7C0S8 307 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 MATN2O00339 956 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 CASC3O15234 703 aaKnown RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 ZSCAN12O43309 604 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 LDB2O43679 373 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 METTL18O95568 372 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 C9P02748 559 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 MT-ND3P03897 115 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 ITGB2P05107 769 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 PBLDP30039 288 aaPredicted RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 ETV5P41161 510 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 NSG1P42857 185 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 CD151P48509 253 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 NPY2RP49146 381 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 CTSCP53634 463 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 XIAPP98170 497 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 MC1RQ01726 317 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 CFHR1Q03591 330 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 RPA4Q13156 261 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 SNX1Q13596 522 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 GPR18Q14330 331 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 PTPRCAPQ14761 206 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 POU6F1Q14863 301 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 CLCA4Q14CN2 919 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 KHDC1Q4VXA5 237 aaKnown RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 AARS2Q5JTZ9 985 aaKnown RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 IRGCQ6NXR0 463 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 DRICH1Q6PGQ1 229 aaPredicted RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 DET1Q7L5Y6 550 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 C11orf96Q7Z7L8 435 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 OOSP2Q86WS3 158 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 KMT5CQ86Y97 462 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 CACNA2D3Q8IZS8 1091 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 NLGN4XQ8N0W4 816 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 NLGN4YQ8NFZ3 816 aaPredicted RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 OR13C4Q8NGS5 318 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 HM13Q8TCT9 377 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 C1orf54Q8WWF1 131 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 C12orf66Q96MD2 445 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 TGM7Q96PF1 710 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 FCRL4Q96PJ5 515 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 CD180Q99467 661 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 ETNK1Q9HBU6 452 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 RAB6BQ9NRW1 208 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 IMP3Q9NV31 184 aaKnown RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 OCIAD1Q9NX40 245 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 BFARQ9NZS9 450 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 RIMKLBQ9ULI2 386 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 PSMD13Q9UNM6 376 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 R3HDM2Q9Y2K5 976 aaKnown RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 PCYT1BQ9Y5K3 369 aaPredicted RBP9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 B3GALT1Q9Y5Z6 326 aa9.42□□□□□ -0.9
FOXRED1-216ENST00000533839 PMS2P1A4D2B8 440 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 EFSO43281 561 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 CEP104O60308 925 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 SUN1O94901 812 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 FGGP02679 453 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 FTH1P02794 183 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 OR56A5P0C7T3 313 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 MTHFD1P11586 935 aaKnown RBP9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 BRAFP15056 766 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 ACRV1P26436 265 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 CSF2RBP32927 897 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 ZNF140P52738 457 aaPredicted RBP9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 PRAMEP78395 509 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 CDK16Q00536 496 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 ACY1Q03154 408 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 MSLNQ13421 630 aaPredicted RBP9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 NFE2L1Q14494 772 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 ITIH4Q14624 930 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 FASTKD1Q53R41 847 aaKnown RBP9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 ANKS6Q68DC2 871 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 HOOK3Q86VS8 718 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 SERPINA9Q86WD7 417 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 RASGRP3Q8IV61 690 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 CARFQ8N187 725 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 ESX1Q8N693 406 aa9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 SIDT2Q8NBJ9 832 aaKnown RBP9.41□□□□□ -0.9
FOXRED1-216ENST00000533839 PPHLN1Q8NEY8 458 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms