RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 CADM2Q8N3J6 435 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 CCDC107Q8WV48 283 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 ADGRE3Q9BY15 652 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 RSPH9Q9H1X1 276 aaPredicted RBP7.77□□□□□ -1.17
CSRP1-218ENST00000533402 RGCCQ9H4X1 137 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 CPNE5Q9HCH3 593 aa7.77□□□□□ -1.17
CSRP1-218ENST00000533402 APOC4-APOC2K7ER74 178 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 APOC2P02655 101 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TPH1P17752 444 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ALDH9A1P49189 494 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 UGT8Q16880 541 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 AKR1C8PQ5T2L2 129 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ZNF773Q6PK81 442 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 SYT12Q8IV01 421 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 PDZD9Q8IXQ8 264 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 UBR7Q8N806 425 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 THAP6Q8TBB0 222 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 HTR3CQ8WXA8 447 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 HSPA12BQ96MM6 686 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 WACQ9BTA9 647 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TNKS2Q9H2K2 1166 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 RC3H2Q9HBD1 1191 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TAS2R13Q9NYV9 303 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 FRMPD4Q14CM0 1322 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 FOXO6A8MYZ6 492 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 PRMT5O14744 637 aaPredicted RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 LIASO43766 372 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MED24O75448 989 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CKMT2P17540 419 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 PTX3P26022 381 aaPredicted RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CAPZA1P52907 286 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ANTXR2P58335 489 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 SP3Q02447 781 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 RAB39AQ14964 217 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 GFOD2Q3B7J2 385 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 FBXO43Q4G163 708 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CTXN3Q4LDR2 81 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CDC42EP5Q6NZY7 148 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 SLFN11Q7Z7L1 901 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 HYLS1Q96M11 299 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ZNF317Q96PQ6 595 aaPredicted RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 GPATCH2LQ9NWQ4 482 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CNOT6Q9ULM6 557 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MARF1Q9Y4F3 1742 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CYP3A7-CYP3A51PA0A087WV96 503 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CYP3A7P24462 503 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 HOXC8P31273 242 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MLLT6P55198 1093 aaPredicted RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ADAM8P78325 824 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 BTN1A1Q13410 526 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 GPALPP1Q8IXQ4 340 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 SCRN2Q96FV2 425 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CGRRF1Q99675 332 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ZNF649Q9BS31 505 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ZNF416Q9BWM5 594 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ZNF471Q9BX82 626 aaPredicted RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ITPAQ9BY32 194 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 LGALS13Q9UHV8 139 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ZNF639Q9UID6 485 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CNOT11Q9UKZ1 510 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CCDC88CQ9P219 2028 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 NINQ8N4C6 2090 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 NOBOXO60393 691 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 STAU1O95793 577 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MAPTP10636 758 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MVKQ03426 396 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MTAPQ13126 283 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 BIKQ13323 160 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 REP15Q6BDI9 236 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 DPPA2Q7Z7J5 298 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TMEM139Q8IV31 216 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TLR8Q9NR97 1041 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ISM1B1AKI9 464 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 C1QTNF3-AMACRE9PGA6 284 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 KMOO15229 486 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 JCHAINP01591 159 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 LTA4HP09960 611 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 DPEP1P16444 411 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CASP6P55212 293 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CMPK2Q5EBM0 449 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ESRP1Q6NXG1 681 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TRIM40Q6P9F5 258 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ARMC10Q8N2F6 343 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 PNMA5Q96PV4 448 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 PRKD2Q9BZL6 878 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MIR1-1HGQ9H1L0 117 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 CCDC86Q9H6F5 360 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TBC1D17Q9HA65 648 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 MRPL17Q9NRX2 175 aaKnown RBP7.76□□□□□ -1.17
CSRP1-218ENST00000533402 HIF3AQ9Y2N7 669 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 TLL2Q9Y6L7 1015 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 ABCB7O75027 752 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 LIPEQ05469 1076 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 GIT2Q14161 759 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 IL23RQ5VWK5 629 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 RAB11FIP2Q7L804 512 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 KIAA0895Q8NCT3 520 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 SUN3Q8TAQ9 357 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 RHBDF1Q96CC6 855 aa7.76□□□□□ -1.17
CSRP1-218ENST00000533402 REPS1Q96D71 796 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms