RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PRSS21Q9Y6M0 314 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 ANKRD11Q6UB99 2663 aaPredicted RBP20.04■□□□□ 0.8
CCS-208ENST00000533244 DNALI1O14645 258 aaPredicted RBP20.03■□□□□ 0.8
CCS-208ENST00000533244 VIPP01282 170 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 MPOP05164 745 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 GSTM1P09488 218 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 IVDP26440 423 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 HALP42357 657 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 GABREP78334 506 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 GSTM4Q03013 218 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 RPE65Q16518 533 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 ST3GAL2Q16842 350 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 FASTKD1Q53R41 847 aaKnown RBP20.03■□□□□ 0.8
CCS-208ENST00000533244 NKAIN2Q5VXU1 208 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 TMEM26Q6ZUK4 368 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 USP53Q70EK8 1073 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 MPP5Q8N3R9 675 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 LILRA3Q8N6C8 439 aaPredicted RBP20.03■□□□□ 0.8
CCS-208ENST00000533244 WDR36Q8NI36 951 aaKnown RBP20.03■□□□□ 0.8
CCS-208ENST00000533244 MFSD3Q96ES6 412 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 DPYSL5Q9BPU6 564 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 CCM2Q9BSQ5 444 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 SEMA6CQ9H3T2 930 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 EPB41L1Q9H4G0 881 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 MARCH4Q9P2E8 410 aaPredicted RBP20.03■□□□□ 0.8
CCS-208ENST00000533244 ZMIZ1Q9ULJ6 1067 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 SATB2Q9UPW6 733 aa20.03■□□□□ 0.8
CCS-208ENST00000533244 KMT2BQ9UMN6 2715 aaPredicted RBP20.03■□□□□ 0.8
CCS-208ENST00000533244 QSOX1O00391 747 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 DUX1O43812 170 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 BRINP1O60477 761 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 HOXB3P14651 431 aaPredicted RBP20.02■□□□□ 0.8
CCS-208ENST00000533244 LIMK2P53671 638 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 EIF3IQ13347 325 aaKnown RBP20.02■□□□□ 0.8
CCS-208ENST00000533244 C3orf38Q5JPI3 329 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 TRIM48Q8IWZ4 208 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 KLHL7Q8IXQ5 586 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 AGGF1Q8N302 714 aaeCLIP20.02■□□□□ 0.8
CCS-208ENST00000533244 OR4D9Q8NGE8 314 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 OR10G6Q8NH81 332 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 CXorf40BQ96DE9 158 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 TTC1Q99614 292 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 TBC1D10AQ9BXI6 508 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 STRADBQ9C0K7 418 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 COG4Q9H9E3 785 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 VPS37BQ9H9H4 285 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 EPB41L5Q9HCM4 733 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 CATSPERZQ9NTU4 200 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 PDP2Q9P2J9 529 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 ASIC3Q9UHC3 531 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 PSMD13Q9UNM6 376 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 AK5Q9Y6K8 562 aa20.02■□□□□ 0.8
CCS-208ENST00000533244 ZZEF1O43149 2961 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 PRAMEF33A0A0G2JMD5 474 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 IGHV5-10-1A0A0J9YXX1 117 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 PMS2P1A4D2B8 440 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 SDR42E2A6NKP2 422 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 GOLGA8MH3BSY2 632 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 OR1I1O60431 355 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 CASQ1P31415 396 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 DR1Q01658 176 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 AARS2Q5JTZ9 985 aaKnown RBP20.02■□□□□ 0.79
CCS-208ENST00000533244 KIAA0930Q6ICG6 404 aaPredicted RBP20.02■□□□□ 0.79
CCS-208ENST00000533244 CAPRIN2Q6IMN6 1127 aaKnown RBP20.02■□□□□ 0.79
CCS-208ENST00000533244 TMEM71Q6P5X7 295 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 WDR74Q6RFH5 385 aaPredicted RBP20.02■□□□□ 0.79
CCS-208ENST00000533244 CES3Q6UWW8 571 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 SYT10Q6XYQ8 523 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 HOOK3Q86VS8 718 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 JAMLQ86YT9 394 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 CFAP206Q8IYR0 622 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 GPR150Q8NGU9 434 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 INSM2Q96T92 566 aaPredicted RBP20.02■□□□□ 0.79
CCS-208ENST00000533244 WWP1Q9H0M0 922 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 ASCL3Q9NQ33 180 aa20.02■□□□□ 0.79
CCS-208ENST00000533244 FAM237BA0A1B0GVD1 139 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 MAGEB16A2A368 324 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 CD3EAPO15446 510 aaKnown RBP20.01■□□□□ 0.79
CCS-208ENST00000533244 THRAP10827 490 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 MTHFD1P11586 935 aaKnown RBP20.01■□□□□ 0.79
CCS-208ENST00000533244 MLLT3P42568 568 aaPredicted RBP20.01■□□□□ 0.79
CCS-208ENST00000533244 ARCN1P48444 511 aaKnown RBP20.01■□□□□ 0.79
CCS-208ENST00000533244 RPA4Q13156 261 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 TRA2AQ13595 282 aaKnown RBP eCLIP20.01■□□□□ 0.79
CCS-208ENST00000533244 GPR18Q14330 331 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 PCGF5Q86SE9 256 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 TMEM135Q86UB9 458 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 LSMEM2Q8N112 164 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 SPDYE1Q8NFV5 336 aaPredicted RBP20.01■□□□□ 0.79
CCS-208ENST00000533244 TMEM159Q96B96 161 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 SIGLEC10Q96LC7 697 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 RMDN2Q96LZ7 410 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 OR52A5Q9H2C5 316 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 OGFRQ9NZT2 677 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 TMEM9Q9P0T7 183 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 FAM8A1Q9UBU6 413 aa20.01■□□□□ 0.79
CCS-208ENST00000533244 PLD2O14939 933 aa20■□□□□ 0.79
CCS-208ENST00000533244 VAPBO95292 243 aa20■□□□□ 0.79
CCS-208ENST00000533244 FTH1P02794 183 aa20■□□□□ 0.79
CCS-208ENST00000533244 SLC35G4P0C7Q5 338 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms