RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 FRYQ5TBA9 3013 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 SDR42E2A6NKP2 422 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 OR52A4PA6NMU1 304 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 EFCAB8A8MWE9 144 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 GOLGA8MH3BSY2 632 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 VIPP01282 170 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 IVDP26440 423 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 ARNTP27540 789 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 CD1CP29017 333 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 PPARGP37231 505 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 SLC19A1P41440 591 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 INHBCP55103 352 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 ZFP36L1Q07352 338 aaKnown RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 DHX34Q14147 1143 aaKnown RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 CLCA4Q14CN2 919 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 AMZ1Q400G9 498 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 KIAA0930Q6ICG6 404 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 B3GNT8Q7Z7M8 397 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 PCGF5Q86SE9 256 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 ZNF761Q86XN6 746 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 SLITRK4Q8IW52 837 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 MPP5Q8N3R9 675 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 CLDN19Q8N6F1 224 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 OR10G6Q8NH81 332 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 ZCCHC14Q8WYQ9 949 aaKnown RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 CXorf40BQ96DE9 158 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 DPYSL5Q9BPU6 564 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 CCM2Q9BSQ5 444 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 EPB41L1Q9H4G0 881 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 CCDC86Q9H6F5 360 aaKnown RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 ARGLU1Q9NWB6 273 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-208ENST00000532560 ANAPC5Q9UJX4 755 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 UNC13CQ8NB66 2214 aa14.74□□□□□ -0.05
CPSF1-208ENST00000532560 CCDC187A0A096LP49 1063 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 FAM237BA0A1B0GVD1 139 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 DUX1O43812 170 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 PAMP19021 973 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 CSF2RBP32927 897 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 LSSP48449 732 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 TTPAP49638 278 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 EIF3IQ13347 325 aaKnown RBP14.73□□□□□ -0.05
CPSF1-208ENST00000532560 SEMA3AQ14563 771 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 IZUMO3Q5VZ72 239 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 CASC4Q6P4E1 433 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 TMEM26Q6ZUK4 368 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 TMPRSS9Q7Z410 1059 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 PIM3Q86V86 326 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 MNS1Q8NEH6 495 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 MDM1Q8TC05 714 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 NUDT22Q9BRQ3 303 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 FOXP3Q9BZS1 431 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 STRADBQ9C0K7 418 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 COG4Q9H9E3 785 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 POLR1BQ9H9Y6 1135 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 RDH14Q9HBH5 336 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 SLC40A1Q9NP59 571 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 MARCH4Q9P2E8 410 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-208ENST00000532560 PRSS21Q9Y6M0 314 aa14.73□□□□□ -0.05
CPSF1-208ENST00000532560 PIKFYVEQ9Y2I7 2098 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 A0A1W2PNU3 283 aaPredicted RBP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 MAGEB16A2A368 324 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 F8W8V4 182 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 SMAPO00193 183 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 CD3EAPO15446 510 aaKnown RBP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 TTI1O43156 1089 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 OR1I1O60431 355 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 DXOO77932 396 aaKnown RBP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 VAPBO95292 243 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 FTH1P02794 183 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 SLC35G4P0C7Q5 338 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 OR56A5P0C7T3 313 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 MTHFD1P11586 935 aaKnown RBP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 GABREP78334 506 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 RPA4Q13156 261 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 MORF4L2Q15014 288 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 RPE65Q16518 533 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 NKAIN2Q5VXU1 208 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 WDR74Q6RFH5 385 aaPredicted RBP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 IGF2-ASQ6U949 168 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 CES3Q6UWW8 571 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 TMEM135Q86UB9 458 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 AGGF1Q8N302 714 aaeCLIP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 SPATA4Q8NEY3 305 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 OR4D9Q8NGE8 314 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 GPR150Q8NGU9 434 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 WDR36Q8NI36 951 aaKnown RBP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 UBXN4Q92575 508 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 AHCYL2Q96HN2 611 aaKnown RBP14.72□□□□□ -0.05
CPSF1-208ENST00000532560 RMDN2Q96LZ7 410 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 KRT12Q99456 494 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 TRIM51Q9BSJ1 452 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 WWP1Q9H0M0 922 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 EPB41L5Q9HCM4 733 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 FAM8A1Q9UBU6 413 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 PSMD13Q9UNM6 376 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 SATB2Q9UPW6 733 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 PCDHGA8Q9Y5G5 932 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 IGF2RP11717 2491 aa14.72□□□□□ -0.05
CPSF1-208ENST00000532560 LIN7AO14910 233 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-208ENST00000532560 ATP8B1O43520 1251 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms