RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 PRAMEF1O95521 474 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ATXN8OSP0DMR3 200 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 PYGMP11217 842 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 AMD1P17707 334 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 NELFEP18615 380 aaKnown RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 CTNNA2P26232 953 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 PBLDP30039 288 aaPredicted RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 PTPN7P35236 360 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 CDKN1CP49918 316 aaPredicted RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 ZNF140P52738 457 aaPredicted RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 FOXM1Q08050 763 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 SPARCL1Q14515 664 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 SKIDA1Q1XH10 827 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 COLEC12Q5KU26 742 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ANKRD20A2Q5SQ80 823 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 LDLRAP1Q5SW96 308 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ANKRD20A1Q5TYW2 823 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 CACHD1Q5VU97 1274 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ANKRD20A3Q5VUR7 823 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 FBXO38Q6PIJ6 1188 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 TMEM139Q8IV31 216 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 CCDC50Q8IVM0 306 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 TRIM48Q8IWZ4 208 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 AVL9Q8NBF6 648 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ACRBPQ8NEB7 543 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 OR4K2Q8NGD2 314 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 CCDC110Q8TBZ0 833 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ZNF398Q8TD17 642 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 BRSK1Q8TDC3 778 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 STARD8Q92502 1023 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 RBM41Q96IZ5 413 aaKnown RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 RMDN2Q96LZ7 410 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 MAP3K3Q99759 626 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 OSBPL8Q9BZF1 889 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ULBP3Q9BZM4 244 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 FAM117AQ9C073 453 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 WWP1Q9H0M0 922 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 RBSNQ9H1K0 784 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 ADNPQ9H2P0 1102 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 CLMPQ9H6B4 373 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 HACD3Q9P035 362 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 CROTQ9UKG9 612 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 TRHDEQ9UKU6 1024 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 EPN1Q9Y6I3 576 aaPredicted RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 USP9YO00507 2555 aaPredicted RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 HIVEP3Q5T1R4 2406 aa12.25□□□□□ -0.45
SDHD-212ENST00000531744 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
SDHD-212ENST00000531744 H7C0C1 242 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 LDB2O43679 373 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 PPFIA2O75334 1257 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 NDUFA10O95299 355 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 MTHFD1P11586 935 aaKnown RBP12.24□□□□□ -0.45
SDHD-212ENST00000531744 NR1D1P20393 614 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 ATP5OP48047 213 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 TAF1AQ15573 450 aaPredicted RBP12.24□□□□□ -0.45
SDHD-212ENST00000531744 DEFB109BQ30KR1 87 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 ODF2Q5BJF6 829 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 FNBP1LQ5T0N5 605 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 KCTD11Q693B1 232 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 CAPRIN2Q6IMN6 1127 aaKnown RBP12.24□□□□□ -0.45
SDHD-212ENST00000531744 CCDC70Q6NSX1 233 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 PWWP2BQ6NUJ5 590 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 IRGCQ6NXR0 463 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 RBM12BQ8IXT5 1001 aaKnown RBP12.24□□□□□ -0.45
SDHD-212ENST00000531744 CXorf40BQ96DE9 158 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 TRIM5Q9C035 493 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 EPN3Q9H201 632 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 FAM96AQ9H5X1 160 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 ZNF71Q9NQZ8 489 aaPredicted RBP12.24□□□□□ -0.45
SDHD-212ENST00000531744 ICE1Q9Y2F5 2266 aa12.24□□□□□ -0.45
SDHD-212ENST00000531744 DNMT3AQ9Y6K1 912 aaPredicted RBP12.24□□□□□ -0.45
SDHD-212ENST00000531744 HEATR5BQ9P2D3 2071 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 TCRBV7S2A1N4TA0A589 114 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 STX7O15400 261 aaKnown RBP12.23□□□□□ -0.45
SDHD-212ENST00000531744 KCNJ13O60928 360 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 RASSF9O75901 435 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 SRP72O76094 671 aaKnown RBP12.23□□□□□ -0.45
SDHD-212ENST00000531744 PDGFAP04085 211 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 EBLN1P0CF75 366 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 RBP3P10745 1247 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
SDHD-212ENST00000531744 DLSTP36957 453 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 ARCN1P48444 511 aaKnown RBP12.23□□□□□ -0.45
SDHD-212ENST00000531744 CSRP3P50461 194 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 ZNF75DP51815 510 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 GEMP55040 296 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 GDF10P55107 478 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 EIF3EP60228 445 aaKnown RBP12.23□□□□□ -0.45
SDHD-212ENST00000531744 COPS2P61201 443 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 KCNC4Q03721 635 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 TLE1Q04724 770 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 GTF2H3Q13889 308 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 IL11RAQ14626 422 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 BCL7AQ4VC05 210 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 CRTC2Q53ET0 693 aaPredicted RBP12.23□□□□□ -0.45
SDHD-212ENST00000531744 ZDHHC20Q5W0Z9 365 aa12.23□□□□□ -0.45
SDHD-212ENST00000531744 C6orf15Q6UXA7 325 aaPredicted RBP12.23□□□□□ -0.45
SDHD-212ENST00000531744 ATG14Q6ZNE5 492 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms