RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 RARRES3Q9UL19 164 aa3.69□□□□□ -1.82
PTPRK-220ENST00000531466 TEX13DA0A0J9YY54 714 aaPredicted RBP3.68□□□□□ -1.82
PTPRK-220ENST00000531466 FAM200BP0CF97 657 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 HALP42357 657 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 THOP1P52888 689 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 LMOD3Q0VAK6 560 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 MFAP5Q13361 173 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 CDONQ4KMG0 1287 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 CXorf66Q5JRM2 361 aaPredicted RBP3.68□□□□□ -1.82
PTPRK-220ENST00000531466 CYP4A22Q5TCH4 519 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 EMC1Q8N766 993 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 ANKRD42Q8N9B4 389 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 SPATA5Q8NB90 893 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 C1orf131Q8NDD1 294 aaKnown RBP3.68□□□□□ -1.82
PTPRK-220ENST00000531466 ZPLD1Q8TCW7 415 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 ZFAND2BQ8WV99 257 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 SOSTQ9BQB4 213 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 ISCA1Q9BUE6 129 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 RNF186Q9NXI6 227 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 NRBP1Q9UHY1 535 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 GJD2Q9UKL4 321 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 YIPF1Q9Y548 306 aa3.68□□□□□ -1.82
PTPRK-220ENST00000531466 ASTN2O75129 1339 aaPredicted RBP3.68□□□□□ -1.82
PTPRK-220ENST00000531466 NKX2-2O95096 273 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 UGT1A4P22310 534 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 PEX19P40855 299 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 PIP4K2AP48426 406 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-220ENST00000531466 CCT5P48643 541 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 CTSCP53634 463 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 LIMK2P53671 638 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 CAMK1Q14012 370 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 NECTIN1Q15223 517 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 SGSM1Q2NKQ1 1148 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 RPAINQ86UA6 219 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 NBPF5PQ86XG9 351 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-220ENST00000531466 SMAP1Q8IYB5 467 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-220ENST00000531466 SLC39A11Q8N1S5 342 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 RASGEF1CQ8N431 466 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 DNAJC22Q8N4W6 341 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 MYRIPQ8NFW9 859 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 OR2T11Q8NH01 316 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 HM13Q8TCT9 377 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 CCT6BQ92526 530 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 FUZQ9BT04 418 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 CLEC7AQ9BXN2 247 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 UPF3AQ9H1J1 476 aaKnown RBP3.67□□□□□ -1.82
PTPRK-220ENST00000531466 PIGMQ9H3S5 423 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 ZHX3Q9H4I2 956 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 HAO1Q9UJM8 370 aa3.67□□□□□ -1.82
PTPRK-220ENST00000531466 PIP5K1CO60331 668 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 CLDN1O95832 211 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 CKMT2P17540 419 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 CDH11P55287 796 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 TRA2BP62995 288 aaKnown RBP3.66□□□□□ -1.82
PTPRK-220ENST00000531466 TEAD2Q15562 447 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 MAPRE1Q15691 268 aaKnown RBP3.66□□□□□ -1.82
PTPRK-220ENST00000531466 GSTA3Q16772 222 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 HPS6Q86YV9 775 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 EGFL6Q8IUX8 553 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 NGEFQ8N5V2 710 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 SMPDL3BQ92485 455 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 GTF3C6Q969F1 213 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 SLC25A18Q9H1K4 315 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 BRF2Q9HAW0 419 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 RIC8AQ9NPQ8 531 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 GPR83Q9NYM4 423 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 NOL7Q9UMY1 257 aaKnown RBP3.66□□□□□ -1.82
PTPRK-220ENST00000531466 CLIC4Q9Y696 253 aa3.66□□□□□ -1.82
PTPRK-220ENST00000531466 IGLV9-49A0A0B4J1Y8 123 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 A0A1W2PQM1 296 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 DNM1LO00429 736 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 TIMM44O43615 452 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 IFIT1P09914 478 aaKnown RBP3.65□□□□□ -1.83
PTPRK-220ENST00000531466 HSD3B1P14060 373 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 CBLP22681 906 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 CPOXP36551 454 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 PGFP49763 221 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 CDR2Q01850 454 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 NEXNQ0ZGT2 675 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 DRP2Q13474 957 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 PNLIPRP3Q17RR3 467 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 ZNF805Q5CZA5 627 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 PSRC1Q6PGN9 363 aaPredicted RBP3.65□□□□□ -1.83
PTPRK-220ENST00000531466 ANKRD23Q86SG2 305 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 SDCCAG8Q86SQ7 713 aaPredicted RBP3.65□□□□□ -1.83
PTPRK-220ENST00000531466 CPOQ8IVL8 374 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 CPXCR1Q8N123 301 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 RAB42Q8N4Z0 105 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 SLC38A9Q8NBW4 561 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 SCLT1Q96NL6 688 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 TRIM6Q9C030 488 aaPredicted RBP3.65□□□□□ -1.83
PTPRK-220ENST00000531466 INTS9Q9NV88 658 aaKnown RBP3.65□□□□□ -1.83
PTPRK-220ENST00000531466 PPP1R14DQ9NXH3 145 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 KCND2Q9NZV8 630 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 LUZP4Q9P127 313 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 PGAP2Q9UHJ9 254 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 INTS6Q9UL03 887 aaKnown RBP3.65□□□□□ -1.83
PTPRK-220ENST00000531466 B3GALT5Q9Y2C3 310 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 SYNRGQ9UMZ2 1314 aa3.65□□□□□ -1.83
PTPRK-220ENST00000531466 MEX3AA1L020 520 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms