RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 POMKQ9H5K3 350 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 WDR6Q9NNW5 1121 aaKnown RBP7.09□□□□□ -1.27
CSDE1-213ENST00000530784 SH3GLB2Q9NR46 395 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 WWOXQ9NZC7 414 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 SELENONQ9NZV5 590 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 PIN4Q9Y237 131 aaKnown RBP7.09□□□□□ -1.27
CSDE1-213ENST00000530784 CLDN16Q9Y5I7 305 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 IGKV6-21A0A0C4DH24 114 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 TMEM150BA6NC51 233 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 C2CD4DB7Z1M9 353 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 CPLX1O14810 134 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 EDIL3O43854 480 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 PIP5K1CO60331 668 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 REC8O95072 547 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 TDP2O95551 362 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 CXCL14O95715 111 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 DSC1Q08554 894 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 GIT2Q14161 759 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 ME3Q16798 604 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 RARS2Q5T160 578 aaKnown RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 ZNF324BQ6AW86 544 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 CATSPER4Q7RTX7 472 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 ZNF410Q86VK4 478 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 TMEM173Q86WV6 379 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 RBFAQ8N0V3 343 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 GHDCQ8N2G8 530 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 TDRD5Q8NAT2 981 aaKnown RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 JPH2Q9BR39 696 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 TTC12Q9H892 705 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 NOD2Q9HC29 1040 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 TBC1D13Q9NVG8 400 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 SUCLA2Q9P2R7 463 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 IL36RNQ9UBH0 155 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 PCDHGB3Q9Y5G1 929 aa7.08□□□□□ -1.28
CSDE1-213ENST00000530784 SRPRBQ9Y5M8 271 aaKnown RBP7.08□□□□□ -1.28
CSDE1-213ENST00000530784 C5orf42Q9H799 3197 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 SOX30O94993 753 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 DEXIO95424 95 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 GLUD1P00367 558 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 SERPINC1P01008 464 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 PDGFBP01127 241 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 CNPP09543 421 aaKnown RBP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 WEE2P0C1S8 567 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 HSD3B1P14060 373 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 EPCAMP16422 314 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 NAGAP17050 411 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 GLUD2P49448 558 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 EVCP57679 992 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 DSCR9P59020 149 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 PSMC5P62195 406 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 NONOQ15233 471 aaKnown RBP eCLIP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 ASIC2Q16515 512 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 TDRD12Q587J7 1177 aaKnown RBP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 PLA2G4FQ68DD2 849 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 CPLX2Q6PUV4 134 aaKnown RBP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 MOXD1Q6UVY6 613 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 FAM83HQ6ZRV2 1179 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 MON1BQ7L1V2 547 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 BLIDQ8IZY5 108 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 RASSF8Q8NHQ8 419 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 ETNPPLQ8TBG4 499 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 URGCPQ8TCY9 931 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 IGSF21Q96ID5 467 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 NPFFR1Q9GZQ6 430 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 STN1Q9H668 368 aaKnown RBP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 AGPAT5Q9NUQ2 364 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 STK39Q9UEW8 545 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 DDX25Q9UHL0 483 aaKnown RBP7.07□□□□□ -1.28
CSDE1-213ENST00000530784 GDAQ9Y2T3 454 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 MUC6Q6W4X9 2439 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 KMT2EQ8IZD2 1858 aa7.07□□□□□ -1.28
CSDE1-213ENST00000530784 LOXHD1Q8IVV2 1947 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 A0A096LPK6 155 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 ASAP2O43150 1006 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 DKC1O60832 514 aaKnown RBP eCLIP7.06□□□□□ -1.28
CSDE1-213ENST00000530784 STBD1O95210 358 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 PAPSS2O95340 614 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-213ENST00000530784 ADAP00813 363 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 GALTP07902 379 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 GPR12P47775 334 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 CCT5P48643 541 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 SLC11A1P49279 550 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 PAPOLAP51003 745 aaKnown RBP7.06□□□□□ -1.28
CSDE1-213ENST00000530784 NUDT6P53370 316 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 KEAP1Q14145 624 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 MYBPC2Q14324 1141 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 PTPN14Q15678 1187 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 SLC18A3Q16572 532 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 LETM2Q2VYF4 491 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 GALNT17Q6IS24 598 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 ANO5Q75V66 913 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 RUFY3Q7L099 469 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 EXOC8Q8IYI6 725 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 GPT2Q8TD30 523 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 CEP170P1Q96L14 293 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 MBOAT7Q96N66 472 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 MFSD1Q9H3U5 465 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 MVB12BQ9H7P6 319 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 DNAJB4Q9UDY4 337 aa7.06□□□□□ -1.28
CSDE1-213ENST00000530784 PROCRQ9UNN8 238 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms