RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 RABIFP47224 123 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 ADARP55265 1226 aaKnown RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 GPS2Q13227 327 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 NFE2L1Q14494 772 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 ALG11Q2TAA5 492 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 ACSBG2Q5FVE4 666 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 TNFAIP8L3Q5GJ75 292 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 WDR45BQ5MNZ6 344 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 FAM83HQ6ZRV2 1179 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 CDHR3Q6ZTQ4 885 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 LRRTM4Q86VH4 590 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 VRK3Q8IV63 474 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CENPLQ8N0S6 344 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 SCG3Q8WXD2 468 aaKnown RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 PIGKQ92643 395 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 EXT2Q93063 718 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 PCED1AQ9H1Q7 454 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 TMEM74BQ9NUR3 256 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 ZSCAN32Q9NX65 697 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 SLC23A2Q9UGH3 650 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 IKZF3Q9UKT9 509 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CORO1CQ9ULV4 474 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 PSMD13Q9UNM6 376 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 HS3ST3A1Q9Y663 406 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 KRT87PA6NCN2 255 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 NPEPPSL1A6NEC2 478 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 PRR33A8MZF0 331 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 HMGB1P1B2RPK0 211 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 H3BMM5 538 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 BCAT2O15382 392 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 POP7O75817 140 aaKnown RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 AP2A2O94973 939 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 FTH1P02794 183 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CELA2BP08218 269 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 ATP1A2P50993 1020 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 SIM2Q14190 667 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 FZD2Q14332 565 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CCDC6Q16204 474 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 BCL7AQ4VC05 210 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 C11orf96Q7Z7L8 435 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 TBC1D1Q86TI0 1168 aaPredicted RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 CFAP206Q8IYR0 622 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CCL4L1Q8NHW4 92 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 MDM1Q8TC05 714 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 HEXDCQ8WVB3 486 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 EEF1AKMT1Q8WVE0 214 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 ISL2Q96A47 359 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 NXNL1Q96CM4 212 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 APOPT1Q96IL0 206 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 PANX3Q96QZ0 392 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CCM2Q9BSQ5 444 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 KLC4Q9NSK0 619 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 SPATS2LQ9NUQ6 558 aaKnown RBP10.47□□□□□ -0.73
SOX6-213ENST00000530378 DNAJC28Q9NX36 388 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 SLC17A7Q9P2U7 560 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 GULP1Q9UBP9 304 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CIDEBQ9UHD4 219 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 KLF15Q9UIH9 416 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 SLC17A4Q9Y2C5 497 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 ACOT9Q9Y305 439 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 COMMD10Q9Y6G5 202 aa10.47□□□□□ -0.73
SOX6-213ENST00000530378 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.73
SOX6-213ENST00000530378 RALGAPA1Q6GYQ0 2036 aa10.46□□□□□ -0.73
SOX6-213ENST00000530378 A0A1B0GVT2 93 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 A0A1W2PR77 199 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 TMEM120BA0PK00 339 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 CHUKO15111 745 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 ZBTB14O43829 449 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 MPOP05164 745 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 AK4P27144 223 aaPredicted RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 RPL10P27635 214 aaKnown RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 AOAHP28039 575 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 CRABP2P29373 138 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 PDHA2P29803 388 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 RPA3P35244 121 aaPredicted RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 NUDT1P36639 197 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 CCNFP41002 786 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 SRP54P61011 504 aaKnown RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 RACK1P63244 317 aaKnown RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 EIF2B5Q13144 721 aaKnown RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 MPP2Q14168 576 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 N4BP2L1Q5TBK1 243 aaPredicted RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 TIFABQ6ZNK6 161 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 SH2D5Q6ZV89 423 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 SPATS2Q86XZ4 545 aaKnown RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 BANPQ8N9N5 519 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 CFAP61Q8NHU2 1237 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 C1orf216Q8TAB5 229 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 SCYL1Q96KG9 808 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 OR2M4Q96R27 311 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 TSSK1BQ9BXA7 367 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 IQCGQ9H095 443 aaKnown RBP10.46□□□□□ -0.74
SOX6-213ENST00000530378 TMEM168Q9H0V1 697 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 SMOC1Q9H4F8 434 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 MED4Q9NPJ6 270 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 IGSF5Q9NSI5 407 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 ST14Q9Y5Y6 855 aa10.46□□□□□ -0.74
SOX6-213ENST00000530378 GOLGA4Q13439 2230 aaKnown RBP10.45□□□□□ -0.74
SOX6-213ENST00000530378 A0A087X1B8 175 aa10.45□□□□□ -0.74
SOX6-213ENST00000530378 SPTY2D1-AS1A0A0U1RR47 76 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms