RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 GBA3Q9H227 469 aa11.3□□□□□ -0.6
SRPRA-203ENST00000528744 PCDHA3Q9Y5H8 950 aa11.3□□□□□ -0.6
SRPRA-203ENST00000528744 EPN1Q9Y6I3 576 aaPredicted RBP11.3□□□□□ -0.6
SRPRA-203ENST00000528744 AGAP14A8MT82 685 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 HACD1B0YJ81 288 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 APOC4-APOC2K7ER74 178 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 STX7O15400 261 aaKnown RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 TOX3O15405 576 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 PPFIA2O75334 1257 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 RASSF9O75901 435 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 NDUFA10O95299 355 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 APOC2P02655 101 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 POLBP06746 335 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 CTNNA1P35221 906 aaKnown RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 DLSTP36957 453 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 CCR10P46092 362 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 ARCN1P48444 511 aaKnown RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 CSRP3P50461 194 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 TMPRSS15P98073 1019 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 TLE1Q04724 770 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 XRCC4Q13426 336 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 LDLRAP1Q5SW96 308 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 FNBP1LQ5T0N5 605 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 CAPRIN2Q6IMN6 1127 aaKnown RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 LCN10Q6JVE6 187 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 PWWP2BQ6NUJ5 590 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 C11orf63Q6NUN7 778 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 C6orf15Q6UXA7 325 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 ATG14Q6ZNE5 492 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 KLHDC8BQ8IXV7 354 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 SLC38A9Q8NBW4 561 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 ACRBPQ8NEB7 543 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 ABHD17AQ96GS6 310 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 OSBPL8Q9BZF1 889 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 ULBP3Q9BZM4 244 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 RAB33BQ9H082 229 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 WWP1Q9H0M0 922 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 RBSNQ9H1K0 784 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 ASB8Q9H765 288 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 SMOXQ9NWM0 555 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 HACD3Q9P035 362 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 FAM8A1Q9UBU6 413 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 TRHDEQ9UKU6 1024 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 HEMK1Q9Y5R4 338 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 DNMT3AQ9Y6K1 912 aaPredicted RBP11.29□□□□□ -0.6
SRPRA-203ENST00000528744 NBASA2RRP1 2371 aa11.29□□□□□ -0.6
SRPRA-203ENST00000528744 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 GOLGA6L3A6NEY3 463 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 MGAT4DA6NG13 374 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 MTSS1O43312 755 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 KCNJ13O60928 360 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 SRP72O76094 671 aaKnown RBP11.28□□□□□ -0.6
SRPRA-203ENST00000528744 PRAMEF1O95521 474 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 PDGFAP04085 211 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 NTRK1P04629 796 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 EBLN1P0CF75 366 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 RBP3P10745 1247 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 SFTPCP11686 197 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 TPH1P17752 444 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 TCN2P20062 427 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 PTMSP20962 102 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 LPOP22079 712 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-203ENST00000528744 CTNNA2P26232 953 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 EIF3EP60228 445 aaKnown RBP11.28□□□□□ -0.6
SRPRA-203ENST00000528744 GTF2H3Q13889 308 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 MAP7Q14244 749 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 ERV3-1Q14264 604 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 TAF1AQ15573 450 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-203ENST00000528744 ZNF658BQ4V348 819 aaPredicted RBP11.28□□□□□ -0.6
SRPRA-203ENST00000528744 GAS2L3Q86XJ1 694 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 RASGRP3Q8IV61 690 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 CCDC170Q8IYT3 715 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 ESX1Q8N693 406 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 LRRC57Q8N9N7 239 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 AVL9Q8NBF6 648 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 CT55Q8WUE5 264 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 RBM41Q96IZ5 413 aaKnown RBP11.28□□□□□ -0.6
SRPRA-203ENST00000528744 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 TTC25Q96NG3 672 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 EPN3Q9H201 632 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 IMP3Q9NV31 184 aaKnown RBP11.28□□□□□ -0.6
SRPRA-203ENST00000528744 KCNMB2Q9Y691 235 aa11.28□□□□□ -0.6
SRPRA-203ENST00000528744 HECTD1Q9ULT8 2610 aa11.27□□□□□ -0.6
SRPRA-203ENST00000528744 TCRBV7S2A1N4TA0A589 114 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 KCNN4O15554 427 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 PJA2O43164 708 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 LDB2O43679 373 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 KATNA1O75449 491 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 METTL18O95568 372 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 MTHFD1P11586 935 aaKnown RBP11.27□□□□□ -0.61
SRPRA-203ENST00000528744 MSH3P20585 1137 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 PDHA2P29803 388 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 ZNF75DP51815 510 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 KPNA2P52292 529 aaKnown RBP11.27□□□□□ -0.61
SRPRA-203ENST00000528744 ZNF140P52738 457 aaPredicted RBP11.27□□□□□ -0.61
SRPRA-203ENST00000528744 GEMP55040 296 aa11.27□□□□□ -0.61
SRPRA-203ENST00000528744 RPS18P62269 152 aaKnown RBP11.27□□□□□ -0.61
SRPRA-203ENST00000528744 SRSF1Q07955 248 aaKnown RBP eCLIP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms