RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 FAM153CQ494X1 144 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 FASTKD1Q53R41 847 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 C6orf132Q5T0Z8 1188 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 KIAA1614Q5VZ46 1190 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 ZNF470Q6ECI4 717 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 TRMT10BQ6PF06 316 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 CRTC3Q6UUV7 619 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 DET1Q7L5Y6 550 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 KCNMB4Q86W47 210 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 PARGQ86W56 976 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 SERPINA9Q86WD7 417 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 HID1Q8IV36 788 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 DDHD1Q8NEL9 900 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 FAM174AQ8TBP5 190 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 DTX3LQ8TDB6 740 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 LMX1AQ8TE12 382 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 SKA1Q96BD8 255 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 ULK4Q96C45 1275 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 CERS2Q96G23 380 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 CNDP2Q96KP4 475 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 NAT9Q9BTE0 207 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 OR2AG1Q9H205 316 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 C20orf96Q9NUD7 363 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 SLC17A6Q9P2U8 582 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 ATXN10Q9UBB4 475 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 FAM169AQ9Y6X4 670 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 NBASA2RRP1 2371 aa11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 SPTBN1Q01082 2364 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-210ENST00000528149 AGAP14A8MT82 685 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 TOR1BO14657 336 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 CD3EAPO15446 510 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 CSF2P04141 144 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 CEACAM5P06731 702 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 HOXC4P09017 264 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 SSTR1P30872 391 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 GNPDA1P46926 289 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 RXRGP48443 463 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 GPX6P59796 221 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 SRP54P61011 504 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 B4GALNT1Q00973 533 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 VAC14Q08AM6 782 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 CBLBQ13191 982 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 THOC5Q13769 683 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 PTK2BQ14289 1009 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 PROX2Q3B8N5 592 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 PLA2G4EQ3MJ16 856 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 GPR33Q49SQ1 333 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 HSP90AA5PQ58FG0 334 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 LDLRAP1Q5SW96 308 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 NEPROQ6NW34 567 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 ZNF574Q6ZN55 896 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 ADGRG6Q86SQ4 1221 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 DCP2Q8IU60 420 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 CCNJLQ8IV13 435 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 OR56A4Q8NGH8 313 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 GSDMBQ8TAX9 411 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 SNRNP27Q8WVK2 155 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 BOCQ9BWV1 1114 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 FAM117AQ9C073 453 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 CDC42EP4Q9H3Q1 356 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 ERVMER34-1Q9H9K5 563 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 CYP4F12Q9HCS2 524 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 PPANQ9NQ55 473 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 IARS2Q9NSE4 1012 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 ZDHHC3Q9NYG2 299 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 KCNK4Q9NYG8 393 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 NINJ2Q9NZG7 142 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 APOBEC3BQ9UH17 382 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 SUFUQ9UMX1 484 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 SLC17A4Q9Y2C5 497 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 ANKRD12Q6UB98 2062 aa11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 UTP20O75691 2785 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-210ENST00000528149 IGLV3-16A0A075B6K0 115 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 OR2AG2A6NM03 316 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 OR1I1O60431 355 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 DNAJC6O75061 913 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 PIAS1O75925 651 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 RASGRP1O95267 797 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 LDOC1O95751 146 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 CDK4P11802 303 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 ZNF8P17098 575 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 MSH3P20585 1137 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 OGNP20774 298 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 KELP23276 732 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 PBLDP30039 288 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 SLC1A2P43004 574 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 CTSCP53634 463 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 TUBB4BP68371 445 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 MPP1Q00013 466 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 NFKB2Q00653 900 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 PPARDQ03181 441 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 GTF2H3Q13889 308 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 EFTUD2Q15029 972 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 PRRT3Q5FWE3 981 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 AARS2Q5JTZ9 985 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 CEP128Q6ZU80 1094 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 TRAPPC5Q8IUR0 188 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 DENND6AQ8IWF6 608 aa11.37□□□□□ -0.59
CCDC90B-210ENST00000528149 PALM2Q8IXS6 379 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms