RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 DNAJC1Q96KC8 554 aaKnown RBP10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 FERMT1Q9BQL6 677 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 SLC12A9Q9BXP2 914 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 ASPSCR1Q9BZE9 553 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 ZCCHC2Q9C0B9 1178 aaKnown RBP10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 WWP1Q9H0M0 922 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 CFAP20Q9Y6A4 193 aaKnown RBP10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 LOC101059948A0A1B0GTJ6 334 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 MGAT4DA6NG13 374 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 CRTAMO95727 393 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 DLGAP3O95886 979 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 MTHFD1P11586 935 aaKnown RBP10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 AKT1P31749 480 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 CAPZBP47756 277 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 ATP1A2P50993 1020 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 LONRF2Q1L5Z9 754 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 ZNF658BQ4V348 819 aaPredicted RBP10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 CEACAM20Q6UY09 585 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 CERS6Q6ZMG9 384 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 ARHGEF18Q6ZSZ5 1173 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 FAM92BQ6ZTR7 304 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 PRSS42Q7Z5A4 293 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 SNX20Q7Z614 316 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 RBM12BQ8IXT5 1001 aaKnown RBP10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 UNC5BQ8IZJ1 945 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 CACNA2D3Q8IZS8 1091 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 NXPE1Q8N323 547 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 RNF10Q8N5U6 811 aaKnown RBP10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 OR2L2Q8NH16 312 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 KLHL6Q8WZ60 621 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 RMDN2Q96LZ7 410 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 NRTNQ99748 197 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 RAB33BQ9H082 229 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 ZNF768Q9H5H4 540 aaKnown RBP10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 SEMA5BQ9P283 1151 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 FAM8A1Q9UBU6 413 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 EPHA6Q9UF33 1036 aa10.21□□□□□ -0.77
PRPF40B-204ENST00000527253 IGLV3-16A0A075B6K0 115 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 IGHV5-51A0A0C4DH38 117 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 TRBV5-4A0A0C4DH59 114 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 GOLGA6L9A6NEM1 432 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 POLR1CO15160 346 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 TOX3O15405 576 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 NKX2-8O15522 239 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 LIASO43766 372 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 STK17BO94768 372 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 AP2A1O95782 977 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 POLBP06746 335 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 PLA2G2AP14555 144 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 ETS1P14921 441 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 PSMA3P25788 255 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 MC4RP32245 332 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 GRIA1P42261 906 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 HALP42357 657 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 OASLQ15646 514 aaKnown RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 CACHD1Q5VU97 1274 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 CAPRIN2Q6IMN6 1127 aaKnown RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 IRGCQ6NXR0 463 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 SLC13A5Q86YT5 568 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 PIANPQ8IYJ0 282 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 CFAP206Q8IYR0 622 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 IL22RA1Q8N6P7 574 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 GLIS1Q8NBF1 620 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 C1orf54Q8WWF1 131 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 MED8Q96G25 268 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 CDKN2AIPNLQ96HQ2 116 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 ELMO2Q96JJ3 720 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 ZNF514Q96K75 400 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 LINC00615Q96LM1 132 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 TEFMQ96QE5 360 aaKnown RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 C19orf43Q9BQ61 176 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 LRRC40Q9H9A6 602 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 ETNK1Q9HBU6 452 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 IMP3Q9NV31 184 aaKnown RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 NLE1Q9NVX2 485 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 IL17BQ9UHF5 180 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 FEZ2Q9UHY8 353 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 CRLS1Q9UJA2 301 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 GUCA1BQ9UMX6 200 aa10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 TMEM184BQ9Y519 407 aaPredicted RBP10.2□□□□□ -0.78
PRPF40B-204ENST00000527253 CCDC78A2IDD5 438 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 MROH6A6NGR9 719 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 OR51F1A6NGY5 319 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 H7C0S8 307 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ZNF189O75820 626 aaPredicted RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 TIAF1O95411 115 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ITGB2P05107 769 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 PTMAP06454 111 aaKnown RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 FAM87AP0C7U9 286 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ATP1B2P14415 290 aaPredicted RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ITGB6P18564 788 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 NELFEP18615 380 aaKnown RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 ITGALP20701 1170 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 F8A1P23610 371 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 MAP4P27816 1152 aaKnown RBP10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 PRLHRP49683 370 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 PDE1BQ01064 536 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 FOXM1Q08050 763 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 SEPT6Q14141 434 aa10.19□□□□□ -0.78
PRPF40B-204ENST00000527253 KCNAB1Q14722 419 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms