RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PRMT5O14744 637 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 LIN7AO14910 233 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 SNX2O60749 519 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 TOP3BO95985 862 aaKnown RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 MT-CO3P00414 261 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 CD151P48509 253 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 ARL4CP56559 192 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 DHX9Q08211 1270 aaKnown RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 CAMK2BQ13554 666 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 SPIDRQ14159 915 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 FRG1Q14331 258 aaKnown RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 HIF1AQ16665 826 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 LONRF1Q17RB8 773 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 MSS51Q4VC12 460 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 CCDC157Q569K6 752 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 NEPROQ6NW34 567 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 RBM44Q6ZP01 1051 aaKnown RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 MICALCLQ6ZW33 695 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 SDCCAG8Q86SQ7 713 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 CILP2Q8IUL8 1156 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 CALML6Q8TD86 181 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 SEC14L1Q92503 715 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 ZNF669Q96BR6 464 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 CARD6Q9BX69 1037 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 TSSK1BQ9BXA7 367 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 COG4Q9H9E3 785 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 INTS10Q9NVR2 710 aaKnown RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 SCHIP1Q9P0W5 487 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 ZNF624Q9P2J8 865 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-203ENST00000526117 WDR37Q9Y2I8 494 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 TEX264Q9Y6I9 313 aa16.92■□□□□ 0.3
LMX1B-203ENST00000526117 IGHV1OR21-1A0A087WYE8 117 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 PDZK1P1A8MUH7 402 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 TMX2-CTNND1H3BSU7 103 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 B4GAT1O43505 415 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 OR1I1O60431 355 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 JUPP14923 745 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 RPL10P27635 214 aaKnown RBP16.91■□□□□ 0.3
LMX1B-203ENST00000526117 SLC19A1P41440 591 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CCL7P80098 99 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CAV1Q03135 178 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CALCOCO2Q13137 446 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 BIRC2Q13490 618 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CRYMQ14894 314 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CLCA4Q14CN2 919 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 SPANXN3Q5MJ09 141 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 STEAP4Q687X5 459 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CAPRIN2Q6IMN6 1127 aaKnown RBP16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CES3Q6UWW8 571 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 MMGT1Q8N4V1 131 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.91■□□□□ 0.3
LMX1B-203ENST00000526117 ZNF592Q92610 1267 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 GATA6Q92908 595 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 GFM1Q96RP9 751 aaKnown RBP16.91■□□□□ 0.3
LMX1B-203ENST00000526117 TMEM121BQ9BXQ6 578 aaPredicted RBP16.91■□□□□ 0.3
LMX1B-203ENST00000526117 OR52A5Q9H2C5 316 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 SLC40A1Q9NP59 571 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 GRHL1Q9NZI5 618 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 PCDHB1Q9Y5F3 818 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 MAD1L1Q9Y6D9 718 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 PRSS21Q9Y6M0 314 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 CEP295Q9C0D2 2601 aa16.91■□□□□ 0.3
LMX1B-203ENST00000526117 ASXL3Q9C0F0 2248 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 BHMG1C9JSJ3 638 aaPredicted RBP16.9■□□□□ 0.3
LMX1B-203ENST00000526117 H3BMM5 538 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 EIF3HO15372 352 aaKnown RBP eCLIP16.9■□□□□ 0.3
LMX1B-203ENST00000526117 CPNE6O95741 557 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 RPLP0P05388 317 aaKnown RBP16.9■□□□□ 0.3
LMX1B-203ENST00000526117 SLC35G4P0C7Q5 338 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 CD1CP29017 333 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 PBLDP30039 288 aaPredicted RBP16.9■□□□□ 0.3
LMX1B-203ENST00000526117 CCKBRP32239 447 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 PDX1P52945 283 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 TARDBPQ13148 414 aaKnown RBP eCLIP16.9■□□□□ 0.3
LMX1B-203ENST00000526117 RPE65Q16518 533 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 ISXQ2M1V0 245 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 ZNF449Q6P9G9 518 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 GALNT7Q86SF2 657 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 GABPB2Q8TAK5 448 aaPredicted RBP16.9■□□□□ 0.3
LMX1B-203ENST00000526117 LPGAT1Q92604 370 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 TRIM56Q9BRZ2 755 aaKnown RBP16.9■□□□□ 0.3
LMX1B-203ENST00000526117 FAM167BQ9BTA0 163 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 TRIM31Q9BZY9 425 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 NRSN2Q9GZP1 204 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 GNPTGQ9UJJ9 305 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 SNX24Q9Y343 169 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 HEBP2Q9Y5Z4 205 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 AKAP13Q12802 2813 aa16.9■□□□□ 0.3
LMX1B-203ENST00000526117 SLC5A10A0PJK1 596 aa16.89■□□□□ 0.29
LMX1B-203ENST00000526117 NDUFS3O75489 264 aa16.89■□□□□ 0.29
LMX1B-203ENST00000526117 VIPP01282 170 aa16.89■□□□□ 0.29
LMX1B-203ENST00000526117 ESR1P03372 595 aa16.89■□□□□ 0.29
LMX1B-203ENST00000526117 MTHFD1P11586 935 aaKnown RBP16.89■□□□□ 0.29
LMX1B-203ENST00000526117 NDUFS1P28331 727 aa16.89■□□□□ 0.29
LMX1B-203ENST00000526117 OR1D5P58170 312 aa16.89■□□□□ 0.29
LMX1B-203ENST00000526117 ZFP36L1Q07352 338 aaKnown RBP16.89■□□□□ 0.29
LMX1B-203ENST00000526117 SEPT7Q16181 437 aaKnown RBP16.89■□□□□ 0.29
LMX1B-203ENST00000526117 BBS9Q3SYG4 887 aa16.89■□□□□ 0.29
LMX1B-203ENST00000526117 GLE1Q53GS7 698 aaKnown RBP16.89■□□□□ 0.29
LMX1B-203ENST00000526117 C8orf74Q6P047 294 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms