RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TMEM229AB2RXF0 380 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 YY2O15391 372 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 FFAR2O15552 330 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 WISP3O95389 354 aaPredicted RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 TOP3BO95985 862 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 CD59P13987 128 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 NME1P15531 152 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 ZNF7P17097 686 aaPredicted RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 MSH3P20585 1137 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 OGNP20774 298 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 NFKBIAP25963 317 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 AKT1P31749 480 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 LEPRP48357 1165 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 RXRGP48443 463 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PRLHRP49683 370 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 THOP1P52888 689 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 MAZP56270 477 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 C21orf59P57076 290 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 TAS2R39P59534 338 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PPARDQ03181 441 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 DLG1Q12959 904 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 THOC5Q13769 683 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 ITGA9Q13797 1035 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 ITIH4Q14624 930 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 CLCA4Q14CN2 919 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 BCL7AQ4VC05 210 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 ACSBG2Q5FVE4 666 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PRRT3Q5FWE3 981 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 LDLRAP1Q5SW96 308 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 BEND6Q5SZJ8 279 aaPredicted RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 ZDHHC20Q5W0Z9 365 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 FAM219BQ5XKK7 198 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 DUS1LQ6P1R4 473 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 SLC30A9Q6PML9 568 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PACS1Q6VY07 963 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 STRA8Q7Z7C7 330 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 CMC1Q7Z7K0 106 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PARGQ86W56 976 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 TRAPPC5Q8IUR0 188 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 EIF1ADQ8N9N8 165 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 SIDT2Q8NBJ9 832 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 ZNF548Q8NEK5 533 aaPredicted RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 GPBAR1Q8TDU6 330 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 EPS8L3Q8TE67 593 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 SAP25Q8TEE9 199 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 JPH3Q8WXH2 748 aaPredicted RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 CAVIN3Q969G5 261 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 OR2M4Q96R27 311 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 AARSD1Q9BTE6 412 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 DHRS4Q9BTZ2 278 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 UNKQ9C0B0 810 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 CDH19Q9H159 772 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 KCNH6Q9H252 994 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PPANQ9NQ55 473 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 PRDM8Q9NQV8 689 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 RAD18Q9NS91 495 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 KLC4Q9NSK0 619 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 NCDNQ9UBB6 729 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 APOBEC3BQ9UH17 382 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 CIDEBQ9UHD4 219 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 RAB23Q9ULC3 237 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PSMD13Q9UNM6 376 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 HCN4Q9Y3Q4 1203 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PCDHGA5Q9Y5G8 931 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 CFAP20Q9Y6A4 193 aaKnown RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 DGKBQ9Y6T7 804 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 FAM186AA6NE01 2351 aa6.37□□□□□ -1.39
CD44-214ENST00000525211 PTPRZ1P23471 2315 aaPredicted RBP6.37□□□□□ -1.39
CD44-214ENST00000525211 ASXL3Q9C0F0 2248 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 DMXL1Q9Y485 3027 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SLC5A10A0PJK1 596 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 OR52A4PA6NMU1 304 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 C4orf47A7E2U8 309 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PRR5-ARHGAP8B1AHC4 643 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 POC1B-GALNT4F8VUJ3 575 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PRMT5O14744 637 aaPredicted RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 TNFRSF10CO14798 259 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PHGDHO43175 533 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 AQP9O43315 295 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 VEGFDO43915 354 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SH3BP5O60239 455 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 NOBOXO60393 691 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PRMT3O60678 531 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 SNX2O60749 519 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 NDUFS3O75489 264 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 TRIM16O95361 564 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 TNFP01375 233 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 GSTA2P09210 222 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 TPBGLP0DKB5 382 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 PKMP14618 531 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 GNSP15586 552 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 H2AFXP16104 143 aaPredicted RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 PAMP19021 973 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 RPS3P23396 243 aaKnown RBP eCLIP6.36□□□□□ -1.39
CD44-214ENST00000525211 RPL10P27635 214 aaKnown RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 AOAHP28039 575 aa6.36□□□□□ -1.39
CD44-214ENST00000525211 EPHA8P29322 1005 aaPredicted RBP6.36□□□□□ -1.39
CD44-214ENST00000525211 PMLP29590 882 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms