RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CNTN6Q9UQ52 1028 aa3.14□□□□□ -1.91
CSDE1-209ENST00000525132 TMEM5Q9Y2B1 443 aa3.14□□□□□ -1.91
CSDE1-209ENST00000525132 DMRT1Q9Y5R6 373 aa3.14□□□□□ -1.91
CSDE1-209ENST00000525132 TRPV2Q9Y5S1 764 aa3.14□□□□□ -1.91
CSDE1-209ENST00000525132 SNX8Q9Y5X2 465 aa3.14□□□□□ -1.91
CSDE1-209ENST00000525132 FLG2Q5D862 2391 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-209ENST00000525132 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 FAM90A20PA6NIJ5 464 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 SAC3D1A6NKF1 404 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ZNF197O14709 1029 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 GUCY1B2O75343 617 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 RPS6KA5O75582 802 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 CTAG2O75638 210 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 BEST1O76090 585 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 CLDN14O95500 239 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PPP1R3DO95685 299 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 HSPA4LO95757 839 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 MLYCDO95822 493 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 GPANK1O95872 356 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 IGKV5-2P06315 115 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 CSH1P0DML2 217 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 CSH2P0DML3 217 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 TGFB3P10600 412 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 UBA1P22314 1058 aaKnown RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PSMA4P25789 261 aaKnown RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ACSL1P33121 698 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PGDP52209 483 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 RPS3AP61247 264 aaKnown RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PLIN5Q00G26 463 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 MC1RQ01726 317 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 GUCY1B3Q02153 619 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 GPS1Q13098 491 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 DCTN2Q13561 401 aaKnown RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 DYRK1AQ13627 763 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 FHL2Q14192 279 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 RASA2Q15283 850 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 MGAT5BQ3V5L5 792 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ZNF569Q5MCW4 686 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 NAA35Q5VZE5 725 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ABLIM2Q6H8Q1 611 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 NAA16Q6N069 864 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 SLC22A25Q6T423 547 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PRSS55Q6UWB4 352 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PAMR1Q6UXH9 720 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 RD3Q7Z3Z2 195 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PXKQ7Z7A4 578 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 SFTPA1Q8IWL2 248 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 RNF168Q8IYW5 571 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 IQCKQ8N0W5 287 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 TAGAPQ8N103 731 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 MAPK1IP1LQ8NDC0 245 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 MRAPQ8TCY5 172 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ABHD5Q8WTS1 349 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 NEU4Q8WWR8 484 aaPredicted RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 TBC1D5Q92609 795 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 SLC45A3Q96JT2 553 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PDLIM2Q96JY6 352 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 SPATA17Q96L03 361 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 TESK2Q96S53 571 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ADPGKQ9BRR6 497 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 FUZQ9BT04 418 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 BEX2Q9BXY8 128 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ALOXE3Q9BYJ1 711 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 TTYH3Q9C0H2 523 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 GALNT9Q9HCQ5 603 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 TM9SF3Q9HD45 589 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 HESX1Q9UBX0 185 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PISDQ9UG56 409 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 ISY1Q9ULR0 285 aaKnown RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 PCDHGB1Q9Y5G3 927 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 SNX5Q9Y5X3 404 aa3.13□□□□□ -1.91
CSDE1-209ENST00000525132 COPG1Q9Y678 874 aaKnown RBP3.13□□□□□ -1.91
CSDE1-209ENST00000525132 SRRM2Q9UQ35 2752 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CCL21O00585 134 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 PEX12O00623 359 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 TSPAN4O14817 238 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CLGNO14967 610 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 VILLO15195 856 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 TLX2O43763 284 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 RNASEH1O60930 286 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ERAL1O75616 437 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 MTA2O94776 668 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 DDHD2O94830 711 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 LARGE1O95461 756 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CLEC3BP05452 202 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CYP21A2P08686 494 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ARSAP15289 507 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 ITIH1P19827 911 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 IL11P20809 199 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 GATA3P23771 443 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 EPHA8P29322 1005 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CD6P30203 668 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 HADHAP40939 763 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 HARS2P49590 506 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 CLK3P49761 638 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 PDX1P52945 283 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 COPB1P53618 953 aaKnown RBP3.12□□□□□ -1.91
CSDE1-209ENST00000525132 SNX16P57768 344 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 NLRP5P59047 1200 aa3.12□□□□□ -1.91
CSDE1-209ENST00000525132 RPL10AP62906 217 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms